Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.88■■□□□ 1.41
SMC5Q8IY18 AL031598.1-201ENST00000561511 1773 ntBASIC23.88■■□□□ 1.41
SMC5Q8IY18 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SMC5Q8IY18 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.88■■□□□ 1.41
SMC5Q8IY18 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SMC5Q8IY18 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
SMC5Q8IY18 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC23.87■■□□□ 1.41
SMC5Q8IY18 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.87■■□□□ 1.41
SMC5Q8IY18 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.87■■□□□ 1.41
SMC5Q8IY18 KRT17P3-201ENST00000420566 1262 ntBASIC23.87■■□□□ 1.41
SMC5Q8IY18 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 KRT18P6-201ENST00000555540 1265 ntBASIC23.87■■□□□ 1.41
SMC5Q8IY18 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.87■■□□□ 1.41
SMC5Q8IY18 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.87■■□□□ 1.41
SMC5Q8IY18 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC5Q8IY18 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.86■■□□□ 1.41
SMC5Q8IY18 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.86■■□□□ 1.41
SMC5Q8IY18 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.86■■□□□ 1.41
SMC5Q8IY18 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.86■■□□□ 1.41
SMC5Q8IY18 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.86■■□□□ 1.41
SMC5Q8IY18 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SMC5Q8IY18 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC5Q8IY18 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
SMC5Q8IY18 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 AL160286.2-201ENST00000567150 934 ntBASIC23.85■■□□□ 1.41
SMC5Q8IY18 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.85■■□□□ 1.41
SMC5Q8IY18 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC5Q8IY18 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMC5Q8IY18 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMC5Q8IY18 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMC5Q8IY18 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMC5Q8IY18 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
SMC5Q8IY18 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SMC5Q8IY18 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC5Q8IY18 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.83■■□□□ 1.41
SMC5Q8IY18 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms