Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM3O75382 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM3O75382 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM3O75382 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM3O75382 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM3O75382 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM3O75382 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TRIM3O75382 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM3O75382 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM3O75382 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM3O75382 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM3O75382 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM3O75382 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.95■□□□□ 0.46
TRIM3O75382 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM3O75382 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.95■□□□□ 0.46
TRIM3O75382 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM3O75382 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 AP000974.1-201ENST00000623909 2387 ntBASIC17.95■□□□□ 0.46
TRIM3O75382 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM3O75382 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM3O75382 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM3O75382 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
TRIM3O75382 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TRIM3O75382 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM3O75382 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRIM3O75382 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM3O75382 YBX1P10-201ENST00000444752 975 ntBASIC17.94■□□□□ 0.46
TRIM3O75382 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM3O75382 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM3O75382 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM3O75382 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM3O75382 AP001412.1-201ENST00000608405 714 ntBASIC17.94■□□□□ 0.46
TRIM3O75382 AC116562.4-201ENST00000641316 2276 ntBASIC17.94■□□□□ 0.46
TRIM3O75382 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM3O75382 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM3O75382 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 HTR7P1-201ENST00000538670 1336 ntBASIC17.94■□□□□ 0.46
TRIM3O75382 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM3O75382 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM3O75382 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM3O75382 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM3O75382 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
TRIM3O75382 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
TRIM3O75382 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM3O75382 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 AP001271.2-201ENST00000624018 1556 ntBASIC17.93■□□□□ 0.46
TRIM3O75382 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM3O75382 AL049637.2-201ENST00000641778 930 ntBASIC17.93■□□□□ 0.46
TRIM3O75382 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.93■□□□□ 0.46
TRIM3O75382 TMEM179-206ENST00000616017 1645 ntBASIC17.93■□□□□ 0.46
TRIM3O75382 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM3O75382 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM3O75382 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRIM3O75382 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM3O75382 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM3O75382 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms