Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMIM4Q8WVI0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SMIM4Q8WVI0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 ANO7L1-203ENST00000602586 1720 ntBASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SMIM4Q8WVI0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 EDA-201ENST00000338901 1233 ntBASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 AC091305.1-201ENST00000479476 895 ntBASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.48■□□□□ 0.23
SMIM4Q8WVI0 MIR6084-201ENST00000622012 110 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms