Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
RBM3P98179 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 YBX1P4-201ENST00000392794 808 ntBASIC12.17□□□□□ -0.46
RBM3P98179 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC12.17□□□□□ -0.46
RBM3P98179 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC12.17□□□□□ -0.46
RBM3P98179 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RBM3P98179 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
RBM3P98179 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RBM3P98179 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC12.17□□□□□ -0.46
RBM3P98179 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
RBM3P98179 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.17□□□□□ -0.46
RBM3P98179 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
RBM3P98179 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RBM3P98179 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC12.17□□□□□ -0.46
RBM3P98179 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RBM3P98179 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.16□□□□□ -0.46
RBM3P98179 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RBM3P98179 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.16□□□□□ -0.46
RBM3P98179 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RBM3P98179 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RBM3P98179 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC12.16□□□□□ -0.46
RBM3P98179 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC12.16□□□□□ -0.46
RBM3P98179 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC12.16□□□□□ -0.46
RBM3P98179 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RBM3P98179 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RBM3P98179 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.15□□□□□ -0.46
RBM3P98179 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 Z98044.1-201ENST00000632503 1764 ntBASIC12.15□□□□□ -0.46
RBM3P98179 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RBM3P98179 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
RBM3P98179 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.15□□□□□ -0.46
RBM3P98179 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.15□□□□□ -0.46
RBM3P98179 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.15□□□□□ -0.46
RBM3P98179 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.15□□□□□ -0.46
RBM3P98179 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RBM3P98179 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC12.15□□□□□ -0.46
RBM3P98179 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.15□□□□□ -0.46
RBM3P98179 AC103724.3-201ENST00000564481 992 ntBASIC12.15□□□□□ -0.46
RBM3P98179 AC099791.2-201ENST00000605725 427 ntBASIC12.15□□□□□ -0.46
RBM3P98179 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.15□□□□□ -0.46
RBM3P98179 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
RBM3P98179 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RBM3P98179 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms