Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.3■□□□□ 0.36
SOX6P35712 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.3■□□□□ 0.36
SOX6P35712 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SOX6P35712 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.3■□□□□ 0.36
SOX6P35712 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.3■□□□□ 0.36
SOX6P35712 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SOX6P35712 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.29■□□□□ 0.36
SOX6P35712 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.29■□□□□ 0.36
SOX6P35712 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 TSPY26P-201ENST00000476365 1326 ntBASIC17.29■□□□□ 0.36
SOX6P35712 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 AC093525.10-201ENST00000625130 1569 ntBASIC17.29■□□□□ 0.36
SOX6P35712 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.29■□□□□ 0.36
SOX6P35712 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.29■□□□□ 0.36
SOX6P35712 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.29■□□□□ 0.36
SOX6P35712 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.29■□□□□ 0.36
SOX6P35712 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SOX6P35712 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.29■□□□□ 0.36
SOX6P35712 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SOX6P35712 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SOX6P35712 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SOX6P35712 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SOX6P35712 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.28■□□□□ 0.36
SOX6P35712 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SOX6P35712 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.28■□□□□ 0.36
SOX6P35712 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.28■□□□□ 0.36
SOX6P35712 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.28■□□□□ 0.36
SOX6P35712 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SOX6P35712 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
SOX6P35712 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SOX6P35712 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX6P35712 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX6P35712 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.27■□□□□ 0.36
SOX6P35712 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SOX6P35712 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX6P35712 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SOX6P35712 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms