Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
VAPBO95292 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
VAPBO95292 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAPBO95292 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
VAPBO95292 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VAPBO95292 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
VAPBO95292 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.39■□□□□ 0.7
VAPBO95292 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VAPBO95292 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
VAPBO95292 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VAPBO95292 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
VAPBO95292 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VAPBO95292 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPBO95292 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
VAPBO95292 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
VAPBO95292 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.39■□□□□ 0.69
VAPBO95292 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.39■□□□□ 0.69
VAPBO95292 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 AC004408.2-201ENST00000623613 2777 ntBASIC19.39■□□□□ 0.69
VAPBO95292 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPBO95292 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
VAPBO95292 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VAPBO95292 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VAPBO95292 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.39■□□□□ 0.69
VAPBO95292 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPBO95292 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VAPBO95292 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.38■□□□□ 0.69
VAPBO95292 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.38■□□□□ 0.69
VAPBO95292 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
VAPBO95292 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.38■□□□□ 0.69
VAPBO95292 PRKY-204ENST00000533551 1019 ntBASIC19.38■□□□□ 0.69
VAPBO95292 AC141586.3-201ENST00000562166 1838 ntBASIC19.38■□□□□ 0.69
VAPBO95292 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.38■□□□□ 0.69
VAPBO95292 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.38■□□□□ 0.69
VAPBO95292 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
VAPBO95292 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.38■□□□□ 0.69
VAPBO95292 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.38■□□□□ 0.69
VAPBO95292 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPBO95292 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.37■□□□□ 0.69
VAPBO95292 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.37■□□□□ 0.69
VAPBO95292 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.37■□□□□ 0.69
VAPBO95292 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.37■□□□□ 0.69
VAPBO95292 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VAPBO95292 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VAPBO95292 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.37■□□□□ 0.69
VAPBO95292 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VAPBO95292 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VAPBO95292 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
VAPBO95292 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 AC026366.1-201ENST00000488803 879 ntBASIC19.37■□□□□ 0.69
VAPBO95292 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.37■□□□□ 0.69
VAPBO95292 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.37■□□□□ 0.69
VAPBO95292 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.37■□□□□ 0.69
VAPBO95292 AL161938.1-201ENST00000569833 2180 ntBASIC19.37■□□□□ 0.69
VAPBO95292 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPBO95292 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.36■□□□□ 0.69
VAPBO95292 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VAPBO95292 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPBO95292 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VAPBO95292 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
VAPBO95292 KRT17P3-201ENST00000420566 1262 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms