Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SUPT3HO75486 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.11■□□□□ 0.65
SUPT3HO75486 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 LTB4R2-202ENST00000528054 3092 ntBASIC19.1■□□□□ 0.65
SUPT3HO75486 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 PNMA6B-201ENST00000538162 1200 ntBASIC19.1■□□□□ 0.65
SUPT3HO75486 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 AC060766.5-201ENST00000590539 871 ntBASIC19.1■□□□□ 0.65
SUPT3HO75486 AC092666.2-201ENST00000613287 246 ntBASIC19.1■□□□□ 0.65
SUPT3HO75486 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SUPT3HO75486 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.1■□□□□ 0.65
SUPT3HO75486 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SUPT3HO75486 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SUPT3HO75486 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SUPT3HO75486 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SUPT3HO75486 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SUPT3HO75486 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.09■□□□□ 0.65
SUPT3HO75486 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SUPT3HO75486 AC083880.1-201ENST00000608266 535 ntBASIC19.09■□□□□ 0.65
SUPT3HO75486 AL109923.1-201ENST00000618799 583 ntBASIC19.09■□□□□ 0.65
SUPT3HO75486 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SUPT3HO75486 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SUPT3HO75486 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SUPT3HO75486 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SUPT3HO75486 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SUPT3HO75486 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.08■□□□□ 0.65
SUPT3HO75486 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SUPT3HO75486 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SUPT3HO75486 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SUPT3HO75486 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
SUPT3HO75486 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.08■□□□□ 0.65
SUPT3HO75486 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SUPT3HO75486 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.08■□□□□ 0.64
SUPT3HO75486 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.08■□□□□ 0.64
SUPT3HO75486 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.08■□□□□ 0.64
SUPT3HO75486 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.08■□□□□ 0.64
SUPT3HO75486 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.08■□□□□ 0.64
SUPT3HO75486 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SUPT3HO75486 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SUPT3HO75486 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.08■□□□□ 0.64
SUPT3HO75486 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SUPT3HO75486 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SUPT3HO75486 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.08■□□□□ 0.64
SUPT3HO75486 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SUPT3HO75486 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SUPT3HO75486 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SUPT3HO75486 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.07■□□□□ 0.64
SUPT3HO75486 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 FZD10-202ENST00000539839 3282 ntBASIC19.07■□□□□ 0.64
SUPT3HO75486 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.07■□□□□ 0.64
SUPT3HO75486 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.07■□□□□ 0.64
SUPT3HO75486 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 AP006587.1-201ENST00000534129 1502 ntBASIC19.07■□□□□ 0.64
SUPT3HO75486 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SUPT3HO75486 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms