Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK2O43353 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RIPK2O43353 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.62■□□□□ 0.73
RIPK2O43353 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK2O43353 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK2O43353 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RIPK2O43353 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
RIPK2O43353 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK2O43353 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK2O43353 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK2O43353 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.61■□□□□ 0.73
RIPK2O43353 KRT17P1-201ENST00000399211 1546 ntBASIC19.61■□□□□ 0.73
RIPK2O43353 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RIPK2O43353 NOC2LP2-201ENST00000407594 1944 ntBASIC19.61■□□□□ 0.73
RIPK2O43353 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RIPK2O43353 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK2O43353 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.61■□□□□ 0.73
RIPK2O43353 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.61■□□□□ 0.73
RIPK2O43353 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.61■□□□□ 0.73
RIPK2O43353 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.61■□□□□ 0.73
RIPK2O43353 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.61■□□□□ 0.73
RIPK2O43353 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK2O43353 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK2O43353 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 AC010980.2-201ENST00000587099 1412 ntBASIC19.6■□□□□ 0.73
RIPK2O43353 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.6■□□□□ 0.73
RIPK2O43353 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.6■□□□□ 0.73
RIPK2O43353 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.6■□□□□ 0.73
RIPK2O43353 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.6■□□□□ 0.73
RIPK2O43353 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.6■□□□□ 0.73
RIPK2O43353 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.6■□□□□ 0.73
RIPK2O43353 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK2O43353 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK2O43353 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.6■□□□□ 0.73
RIPK2O43353 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK2O43353 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK2O43353 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RIPK2O43353 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RIPK2O43353 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RIPK2O43353 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RIPK2O43353 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RIPK2O43353 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.59■□□□□ 0.73
RIPK2O43353 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.59■□□□□ 0.73
RIPK2O43353 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RIPK2O43353 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK2O43353 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK2O43353 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RIPK2O43353 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RIPK2O43353 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RIPK2O43353 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.58■□□□□ 0.73
RIPK2O43353 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms