Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 AC006333.2-201ENST00000607957 2099 ntBASIC19.45■□□□□ 0.7
VPS11Q9H270 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.45■□□□□ 0.7
VPS11Q9H270 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
VPS11Q9H270 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.45■□□□□ 0.7
VPS11Q9H270 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VPS11Q9H270 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VPS11Q9H270 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS11Q9H270 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS11Q9H270 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS11Q9H270 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS11Q9H270 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS11Q9H270 AC004911.1-201ENST00000416316 871 ntBASIC19.44■□□□□ 0.7
VPS11Q9H270 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS11Q9H270 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VPS11Q9H270 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.44■□□□□ 0.7
VPS11Q9H270 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.44■□□□□ 0.7
VPS11Q9H270 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
VPS11Q9H270 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VPS11Q9H270 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.44■□□□□ 0.7
VPS11Q9H270 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VPS11Q9H270 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS11Q9H270 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 GPX1P1-201ENST00000388829 606 ntBASIC19.43■□□□□ 0.7
VPS11Q9H270 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VPS11Q9H270 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS11Q9H270 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.43■□□□□ 0.7
VPS11Q9H270 AC116351.2-201ENST00000606540 1585 ntBASIC19.43■□□□□ 0.7
VPS11Q9H270 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.43■□□□□ 0.7
VPS11Q9H270 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VPS11Q9H270 AC009113.1-201ENST00000570267 2443 ntBASIC19.43■□□□□ 0.7
VPS11Q9H270 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VPS11Q9H270 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VPS11Q9H270 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VPS11Q9H270 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS11Q9H270 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS11Q9H270 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
VPS11Q9H270 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS11Q9H270 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.42■□□□□ 0.7
VPS11Q9H270 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VPS11Q9H270 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.42■□□□□ 0.7
VPS11Q9H270 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VPS11Q9H270 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.41■□□□□ 0.7
VPS11Q9H270 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VPS11Q9H270 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.41■□□□□ 0.7
VPS11Q9H270 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
VPS11Q9H270 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms