Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.415e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-212ENST00000556184 2443 ntTSL 1 (best)11.52□□□□□ -0.575e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC11.26□□□□□ -0.615e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-211ENST00000555547 2057 ntTSL 510.3□□□□□ -0.765e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-216ENST00000556647 644 ntTSL 29.2□□□□□ -0.945e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.985e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-219ENST00000557460 939 ntTSL 58.8□□□□□ -15e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-207ENST00000554465 3044 ntTSL 1 (best)8.79□□□□□ -15e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-213ENST00000556330 546 ntTSL 28.72□□□□□ -1.015e-14■■□□□ 11.9
SMNDC1O75940 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)16.64■□□□□ 0.254e-11■■□□□ 11.9
SMNDC1O75940 MSH5-SAPCD1-206ENST00000491552 706 ntTSL 314.54□□□□□ -0.084e-11■■□□□ 11.9
SMNDC1O75940 MSH5-216ENST00000484309 857 ntTSL 511.04□□□□□ -0.644e-11■■□□□ 11.9
SMNDC1O75940 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC10.03□□□□□ -0.84e-11■■□□□ 11.9
SMNDC1O75940 MSH5-211ENST00000463144 2296 ntTSL 59.88□□□□□ -0.834e-11■■□□□ 11.9
SMNDC1O75940 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.482e-7■■□□□ 11.9
SMNDC1O75940 GPI-208ENST00000588991 2021 ntTSL 219.99■□□□□ 0.792e-7■■□□□ 11.9
SMNDC1O75940 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.473e-11■■□□□ 11.9
SMNDC1O75940 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.98■□□□□ 0.313e-11■■□□□ 11.9
SMNDC1O75940 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.58■□□□□ 0.082e-7■■□□□ 11.9
SMNDC1O75940 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.74□□□□□ -1.172e-7■■□□□ 11.9
SMNDC1O75940 SNORA22B-201ENST00000383876 138 ntBASIC5.97□□□□□ -1.453e-11■■□□□ 11.9
SMNDC1O75940 CCT6A-208ENST00000493855 261 ntTSL 24.67□□□□□ -1.663e-11■■□□□ 11.9
SMNDC1O75940 SRRM2-222ENST00000575009 1146 ntTSL 523.44■■□□□ 1.349e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)21.09■□□□□ 0.979e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)17.13■□□□□ 0.339e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-225ENST00000576076 914 nt14.92□□□□□ -0.029e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-208ENST00000571378 2870 ntTSL 1 (best)14.88□□□□□ -0.039e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.55□□□□□ -0.49e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-212ENST00000572952 1118 ntTSL 211.93□□□□□ -0.59e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-209ENST00000572278 711 ntTSL 29.27□□□□□ -0.939e-12■■□□□ 11.9
SMNDC1O75940 SRRM2-215ENST00000573498 994 ntTSL 37.53□□□□□ -1.29e-12■■□□□ 11.9
SMNDC1O75940 PLXNB1-209ENST00000466353 626 ntTSL 316.78■□□□□ 0.286e-9■■□□□ 11.9
SMNDC1O75940 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.222e-25■■□□□ 11.9
SMNDC1O75940 COX7B-201ENST00000373335 497 ntTSL 25.3□□□□□ -1.562e-25■■□□□ 11.9
SMNDC1O75940 RPL10A-204ENST00000478340 962 ntTSL 215.82■□□□□ 0.123e-6■■□□□ 11.9
SMNDC1O75940 RPL10A-205ENST00000490335 632 ntTSL 213.95□□□□□ -0.183e-6■■□□□ 11.9
SMNDC1O75940 RPL10A-203ENST00000467020 1069 ntTSL 313.21□□□□□ -0.293e-6■■□□□ 11.9
SMNDC1O75940 RPL10A-202ENST00000464112 1063 ntTSL 1 (best)11.61□□□□□ -0.553e-6■■□□□ 11.9
SMNDC1O75940 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.733e-6■■□□□ 11.9
SMNDC1O75940 TMC6-214ENST00000590162 517 ntTSL 213.55□□□□□ -0.242e-9■■□□□ 11.9
SMNDC1O75940 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.34e-8■■□□□ 11.9
SMNDC1O75940 RPL32-203ENST00000396957 1749 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.594e-8■■□□□ 11.9
SMNDC1O75940 RPL32-204ENST00000429711 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.844e-8■■□□□ 11.9
SMNDC1O75940 RPL32-201ENST00000273223 567 ntTSL 3 BASIC8.29□□□□□ -1.084e-8■■□□□ 11.9
SMNDC1O75940 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.464e-8■■□□□ 11.9
SMNDC1O75940 RPL32-207ENST00000452606 631 ntTSL 25.72□□□□□ -1.494e-8■■□□□ 11.9
SMNDC1O75940 RPL32-208ENST00000457131 555 ntTSL 25.08□□□□□ -1.64e-8■■□□□ 11.9
SMNDC1O75940 EHBP1-216ENST00000471179 588 ntTSL 215.78■□□□□ 0.122e-6■■□□□ 11.8
SMNDC1O75940 EIF1-204ENST00000469308 815 ntTSL 220.33■□□□□ 0.851e-6■■□□□ 11.8
SMNDC1O75940 EIF1-202ENST00000462917 2170 ntTSL 1 (best)19.32■□□□□ 0.681e-6■■□□□ 11.8
SMNDC1O75940 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.161e-6■■□□□ 11.8
SMNDC1O75940 EIF1-201ENST00000310837 1120 ntTSL 1 (best)7.78□□□□□ -1.161e-6■■□□□ 11.8
SMNDC1O75940 EIF1-207ENST00000591776 797 ntTSL 4 BASIC6.67□□□□□ -1.341e-6■■□□□ 11.8
SMNDC1O75940 EIF1-205ENST00000482111 1428 ntTSL 25.8□□□□□ -1.481e-6■■□□□ 11.8
SMNDC1O75940 SNORD32A-201ENST00000364805 84 ntBASIC4.37□□□□□ -1.711e-323■■□□□ 11.8
SMNDC1O75940 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.35■□□□□ 0.851e-6■■□□□ 11.8
SMNDC1O75940 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.841e-6■■□□□ 11.8
SMNDC1O75940 KCNH2-204ENST00000461280 2430 ntTSL 1 (best)20.06■□□□□ 0.81e-6■■□□□ 11.8
SMNDC1O75940 KCNH2-205ENST00000473610 2782 ntTSL 219.24■□□□□ 0.671e-6■■□□□ 11.8
SMNDC1O75940 KCNH2-206ENST00000532957 3374 ntTSL 219.08■□□□□ 0.651e-6■■□□□ 11.8
SMNDC1O75940 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.95■□□□□ 0.621e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-207ENST00000525995 592 ntTSL 419.33■□□□□ 0.685e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-203ENST00000524932 1286 ntTSL 518.71■□□□□ 0.595e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-228ENST00000534246 523 ntTSL 214.19□□□□□ -0.145e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-210ENST00000527419 571 ntTSL 513.73□□□□□ -0.215e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-216ENST00000530702 563 ntTSL 212.14□□□□□ -0.475e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-212ENST00000528562 601 ntTSL 411.42□□□□□ -0.585e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-221ENST00000532082 1069 ntTSL 1 (best)11.14□□□□□ -0.635e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-214ENST00000530211 591 ntTSL 210.03□□□□□ -0.85e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-219ENST00000531507 591 ntTSL 59.36□□□□□ -0.915e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-226ENST00000532570 573 ntTSL 59.07□□□□□ -0.965e-6■■□□□ 11.8
SMNDC1O75940 EIF4G2-206ENST00000525972 584 ntTSL 26.33□□□□□ -1.45e-6■■□□□ 11.8
SMNDC1O75940 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.7■□□□□ 0.914e-19■■□□□ 11.8
SMNDC1O75940 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.324e-19■■□□□ 11.8
SMNDC1O75940 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.94■□□□□ 0.34e-19■■□□□ 11.8
SMNDC1O75940 MGEA5-208ENST00000479811 695 ntTSL 59.91□□□□□ -0.824e-19■■□□□ 11.8
SMNDC1O75940 MGEA5-211ENST00000494347 712 ntTSL 29.17□□□□□ -0.944e-19■■□□□ 11.8
SMNDC1O75940 MGEA5-210ENST00000492204 519 ntTSL 27.54□□□□□ -1.24e-19■■□□□ 11.8
SMNDC1O75940 MGEA5-209ENST00000482611 1664 ntTSL 1 (best)6.69□□□□□ -1.344e-19■■□□□ 11.8
SMNDC1O75940 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.3■■□□□ 1.327e-6■■□□□ 11.8
SMNDC1O75940 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.917e-6■■□□□ 11.8
SMNDC1O75940 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.96■□□□□ 0.637e-6■■□□□ 11.8
SMNDC1O75940 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.67e-6■■□□□ 11.8
SMNDC1O75940 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.547e-6■■□□□ 11.8
SMNDC1O75940 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.477e-6■■□□□ 11.8
SMNDC1O75940 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.01■□□□□ 0.477e-6■■□□□ 11.8
SMNDC1O75940 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.477e-6■■□□□ 11.8
SMNDC1O75940 MOGS-204ENST00000448666 1616 ntTSL 1 (best)17.29■□□□□ 0.367e-6■■□□□ 11.8
SMNDC1O75940 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.26■□□□□ 0.357e-6■■□□□ 11.8
SMNDC1O75940 MED10-203ENST00000504058 648 ntTSL 217.18■□□□□ 0.347e-6■■□□□ 11.8
SMNDC1O75940 ZNF326-204ENST00000394583 1956 ntTSL 1 (best)17.11■□□□□ 0.337e-6■■□□□ 11.8
SMNDC1O75940 DHRS3-201ENST00000430996 826 ntTSL 316.77■□□□□ 0.287e-6■■□□□ 11.8
SMNDC1O75940 MOGS-207ENST00000462443 532 ntTSL 216.76■□□□□ 0.277e-6■■□□□ 11.8
SMNDC1O75940 GUK1-239ENST00000498115 796 ntTSL 516.55■□□□□ 0.245e-8■■□□□ 11.8
SMNDC1O75940 RABL6-205ENST00000435930 3328 ntTSL 216.47■□□□□ 0.237e-6■■□□□ 11.8
SMNDC1O75940 INTS11-216ENST00000478641 3079 ntTSL 216.31■□□□□ 0.27e-6■■□□□ 11.8
SMNDC1O75940 DENND4B-205ENST00000472932 541 ntTSL 516.28■□□□□ 0.27e-6■■□□□ 11.8
SMNDC1O75940 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.087e-6■■□□□ 11.8
SMNDC1O75940 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.057e-6■■□□□ 11.8
SMNDC1O75940 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.057e-6■■□□□ 11.8
Retrieved 100 of 11,362 protein–RNA pairs in 351.5 ms