RNA–Protein interactions for RNA: ENST00000493855.1

CCT6A-208, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

TSL 2

Gene CCT6A, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-208ENST00000493855 CHIC1Q5VXU3 224 aa12.31□□□□□ -0.44
CCT6A-208ENST00000493855 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.45
CCT6A-208ENST00000493855 PHF23Q9BUL5 403 aaPredicted RBP10.77□□□□□ -0.69
CCT6A-208ENST00000493855 SENP3Q9H4L4 574 aaPredicted RBP10.49□□□□□ -0.73
CCT6A-208ENST00000493855 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
CCT6A-208ENST00000493855 FOXD1Q16676 465 aa9.59□□□□□ -0.87
CCT6A-208ENST00000493855 ADRA2BP18089 450 aa9.48□□□□□ -0.89
CCT6A-208ENST00000493855 POTEDQ86YR6 584 aa9.41□□□□□ -0.9
CCT6A-208ENST00000493855 PPP6R1Q9UPN7 881 aa9.4□□□□□ -0.9
CCT6A-208ENST00000493855 PIAS4Q8N2W9 510 aaPredicted RBP9.22□□□□□ -0.93
CCT6A-208ENST00000493855 KCNA4P22459 653 aa9.07□□□□□ -0.96
CCT6A-208ENST00000493855 PPP4R3CPQ6ZMV5 832 aa8.99□□□□□ -0.97
CCT6A-208ENST00000493855 NCBP3Q53F19 620 aaKnown RBP8.95□□□□□ -0.98
CCT6A-208ENST00000493855 MSH5O43196 834 aa8.9□□□□□ -0.98
CCT6A-208ENST00000493855 EHMT2Q96KQ7 1210 aa8.87□□□□□ -0.99
CCT6A-208ENST00000493855 SCAF1Q9H7N4 1312 aaKnown RBP8.83□□□□□ -1
CCT6A-208ENST00000493855 SLC4A1APQ9BWU0 796 aaKnown RBP8.77□□□□□ -1.01
CCT6A-208ENST00000493855 CNKSR2Q8WXI2 1034 aa8.7□□□□□ -1.02
CCT6A-208ENST00000493855 NPM3O75607 178 aaKnown RBP8.68□□□□□ -1.02
CCT6A-208ENST00000493855 CSRNP3Q8WYN3 585 aa8.51□□□□□ -1.05
CCT6A-208ENST00000493855 MAPK8IP2Q13387 824 aaPredicted RBP8.48□□□□□ -1.05
CCT6A-208ENST00000493855 RNF216Q9NWF9 866 aaPredicted RBP8.43□□□□□ -1.06
CCT6A-208ENST00000493855 DMRT2Q9Y5R5 561 aa8.36□□□□□ -1.07
CCT6A-208ENST00000493855 FOXD4L1Q9NU39 408 aa8.34□□□□□ -1.07
CCT6A-208ENST00000493855 DNAJC5BQ9UF47 199 aa8.32□□□□□ -1.08
CCT6A-208ENST00000493855 ZBTB22O15209 634 aa8.28□□□□□ -1.08
CCT6A-208ENST00000493855 HOXD11P31277 338 aaPredicted RBP8.27□□□□□ -1.09
CCT6A-208ENST00000493855 DCAF8L1A6NGE4 600 aa8.13□□□□□ -1.11
CCT6A-208ENST00000493855 MYCNP04198 464 aaPredicted RBP8.1□□□□□ -1.11
CCT6A-208ENST00000493855 SLC4A2P04920 1241 aa8.06□□□□□ -1.12
CCT6A-208ENST00000493855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.03□□□□□ -1.125e-6■□□□□ 10.1
CCT6A-208ENST00000493855 ATXN8OSP0DMR3 200 aa8.02□□□□□ -1.13
CCT6A-208ENST00000493855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.97□□□□□ -1.13
CCT6A-208ENST00000493855 HNRNPUL2Q1KMD3 747 aaKnown RBP7.97□□□□□ -1.13
CCT6A-208ENST00000493855 SAMD1Q6SPF0 538 aaPredicted RBP7.91□□□□□ -1.14
CCT6A-208ENST00000493855 CACNB1Q02641 598 aaPredicted RBP7.89□□□□□ -1.15
CCT6A-208ENST00000493855 APLP2Q06481 763 aa7.87□□□□□ -1.15
CCT6A-208ENST00000493855 U3KPZ7 1027 aaPredicted RBP7.8□□□□□ -1.16
CCT6A-208ENST00000493855 FKBP8Q14318 412 aa7.79□□□□□ -1.16
CCT6A-208ENST00000493855 ATF5Q9Y2D1 282 aaPredicted RBP7.71□□□□□ -1.18
CCT6A-208ENST00000493855 ZNF219Q9P2Y4 722 aaPredicted RBP7.67□□□□□ -1.18
CCT6A-208ENST00000493855 AMER1Q5JTC6 1135 aaPredicted RBP7.66□□□□□ -1.18
CCT6A-208ENST00000493855 TRHP20396 242 aaPredicted RBP7.59□□□□□ -1.19
CCT6A-208ENST00000493855 CAPN15O75808 1086 aa7.58□□□□□ -1.2
CCT6A-208ENST00000493855 FBLN2P98095 1184 aa7.58□□□□□ -1.2
CCT6A-208ENST00000493855 RTN4Q9NQC3 1192 aaKnown RBP7.53□□□□□ -1.2
CCT6A-208ENST00000493855 C1QBPQ07021 282 aaKnown RBP7.52□□□□□ -1.21
CCT6A-208ENST00000493855 RNF39Q9H2S5 420 aa7.52□□□□□ -1.21
CCT6A-208ENST00000493855 FBXO3Q9UK99 471 aa7.51□□□□□ -1.21
CCT6A-208ENST00000493855 SPDYE4A6NLX3 237 aa7.5□□□□□ -1.21
CCT6A-208ENST00000493855 SPINK5Q9NQ38 1064 aaPredicted RBP7.5□□□□□ -1.21
CCT6A-208ENST00000493855 ZBTB12Q9Y330 459 aaPredicted RBP7.49□□□□□ -1.21
CCT6A-208ENST00000493855 POLA2Q14181 598 aa7.48□□□□□ -1.21
CCT6A-208ENST00000493855 ABCB7O75027 752 aa7.4□□□□□ -1.22
CCT6A-208ENST00000493855 MKRN4PQ13434 485 aaPredicted RBP7.4□□□□□ -1.22
CCT6A-208ENST00000493855 SLC24A1O60721 1099 aa7.38□□□□□ -1.23
CCT6A-208ENST00000493855 VASPP50552 380 aaPredicted RBP7.32□□□□□ -1.24
CCT6A-208ENST00000493855 POTEHQ6S545 545 aa7.31□□□□□ -1.24
CCT6A-208ENST00000493855 PROM2Q8N271 834 aa7.29□□□□□ -1.24
CCT6A-208ENST00000493855 ZNF692Q9BU19 519 aaPredicted RBP7.28□□□□□ -1.24
CCT6A-208ENST00000493855 DSG3P32926 999 aa7.26□□□□□ -1.25
CCT6A-208ENST00000493855 SPDYE2BA6NHP3 402 aa7.25□□□□□ -1.25
CCT6A-208ENST00000493855 SPDYE6P0CI01 402 aa7.25□□□□□ -1.25
CCT6A-208ENST00000493855 SPDYE2Q495Y8 402 aa7.25□□□□□ -1.25
CCT6A-208ENST00000493855 DCAF8L2P0C7V8 631 aa7.23□□□□□ -1.25
CCT6A-208ENST00000493855 KLHL34Q8N239 644 aa7.23□□□□□ -1.25
CCT6A-208ENST00000493855 OSCARQ8IYS5 282 aa7.22□□□□□ -1.25
CCT6A-208ENST00000493855 STAG3Q9UJ98 1225 aa7.21□□□□□ -1.26
CCT6A-208ENST00000493855 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
CCT6A-208ENST00000493855 PLCD3Q8N3E9 789 aa7.19□□□□□ -1.26
CCT6A-208ENST00000493855 IFNLR1Q8IU57 520 aaPredicted RBP7.17□□□□□ -1.26
CCT6A-208ENST00000493855 PABPN1Q86U42 306 aaKnown RBP eCLIP7.16□□□□□ -1.26
CCT6A-208ENST00000493855 SSUH2Q9Y2M2 353 aa7.14□□□□□ -1.27
CCT6A-208ENST00000493855 MIER1Q8N108 512 aa7.13□□□□□ -1.27
CCT6A-208ENST00000493855 SPOCK2Q92563 424 aa7.13□□□□□ -1.27
CCT6A-208ENST00000493855 ZBTB47Q9UFB7 747 aaPredicted RBP7.12□□□□□ -1.27
CCT6A-208ENST00000493855 ECM2O94769 699 aaPredicted RBP7.06□□□□□ -1.28
CCT6A-208ENST00000493855 RBM42Q9BTD8 480 aaKnown RBP7.05□□□□□ -1.28
CCT6A-208ENST00000493855 PLCB2Q00722 1185 aa7.02□□□□□ -1.29
CCT6A-208ENST00000493855 PKD2Q13563 968 aa7.02□□□□□ -1.29
CCT6A-208ENST00000493855 CIZ1Q9ULV3 898 aaPredicted RBP7.02□□□□□ -1.29
CCT6A-208ENST00000493855 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.01□□□□□ -1.29
CCT6A-208ENST00000493855 HAP1P54257 671 aaPredicted RBP7□□□□□ -1.29
CCT6A-208ENST00000493855 SPDYE1Q8NFV5 336 aaPredicted RBP6.99□□□□□ -1.29
CCT6A-208ENST00000493855 AKT1S1Q96B36 256 aa6.97□□□□□ -1.29
CCT6A-208ENST00000493855 CLEC11AQ9Y240 323 aa6.97□□□□□ -1.29
CCT6A-208ENST00000493855 TRIM41Q8WV44 630 aa6.96□□□□□ -1.3
CCT6A-208ENST00000493855 PRR29P0C7W0 189 aa6.93□□□□□ -1.3
CCT6A-208ENST00000493855 GSE1Q14687 1217 aa6.93□□□□□ -1.3
CCT6A-208ENST00000493855 BBXQ8WY36 941 aaPredicted RBP6.92□□□□□ -1.3
CCT6A-208ENST00000493855 TAOK2Q9UL54 1235 aa6.91□□□□□ -1.3
CCT6A-208ENST00000493855 CFAP44Q96MT7 982 aa6.89□□□□□ -1.31
CCT6A-208ENST00000493855 RGL2O15211 777 aa6.88□□□□□ -1.31
CCT6A-208ENST00000493855 DCAF8Q5TAQ9 597 aa6.88□□□□□ -1.31
CCT6A-208ENST00000493855 PAXIP1Q6ZW49 1069 aaPredicted RBP6.88□□□□□ -1.31
CCT6A-208ENST00000493855 FAM212AQ96EL1 285 aa6.88□□□□□ -1.31
CCT6A-208ENST00000493855 CHGAP10645 457 aaKnown RBP6.87□□□□□ -1.31
CCT6A-208ENST00000493855 REM2Q8IYK8 340 aaPredicted RBP6.86□□□□□ -1.31
CCT6A-208ENST00000493855 NPM1P06748 294 aaKnown RBP eCLIP6.84□□□□□ -1.31
CCT6A-208ENST00000493855 VSIG10Q8N0Z9 540 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms