RNA–Protein interactions for RNA: ENST00000556330.5

SRSF5-213, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-213ENST00000556330 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
SRSF5-213ENST00000556330 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
SRSF5-213ENST00000556330 NISCHQ9Y2I1 1504 aa21.66■■□□□ 1.06
SRSF5-213ENST00000556330 PHF23Q9BUL5 403 aaPredicted RBP20.02■□□□□ 0.8
SRSF5-213ENST00000556330 SENP3Q9H4L4 574 aaPredicted RBP19.8■□□□□ 0.76
SRSF5-213ENST00000556330 CCDC180Q9P1Z9 1646 aa19.01■□□□□ 0.63
SRSF5-213ENST00000556330 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
SRSF5-213ENST00000556330 FOXD1Q16676 465 aa18.25■□□□□ 0.51
SRSF5-213ENST00000556330 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
SRSF5-213ENST00000556330 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
SRSF5-213ENST00000556330 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
SRSF5-213ENST00000556330 ABCC9O60706 1549 aa17.8■□□□□ 0.44
SRSF5-213ENST00000556330 DCAF8L2P0C7V8 631 aa17.74■□□□□ 0.43
SRSF5-213ENST00000556330 NACADO15069 1562 aa17.73■□□□□ 0.43
SRSF5-213ENST00000556330 ADRA2BP18089 450 aa17.65■□□□□ 0.42
SRSF5-213ENST00000556330 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
SRSF5-213ENST00000556330 RB1CC1Q8TDY2 1594 aa17.56■□□□□ 0.4
SRSF5-213ENST00000556330 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
SRSF5-213ENST00000556330 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
SRSF5-213ENST00000556330 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
SRSF5-213ENST00000556330 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
SRSF5-213ENST00000556330 MSH5O43196 834 aa16.91■□□□□ 0.3
SRSF5-213ENST00000556330 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
SRSF5-213ENST00000556330 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
SRSF5-213ENST00000556330 SUPT5HO00267 1087 aaKnown RBP16.78■□□□□ 0.28
SRSF5-213ENST00000556330 RSF1Q96T23 1441 aaPredicted RBP16.74■□□□□ 0.27
SRSF5-213ENST00000556330 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
SRSF5-213ENST00000556330 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
SRSF5-213ENST00000556330 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
SRSF5-213ENST00000556330 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
SRSF5-213ENST00000556330 PEG3Q9GZU2 1588 aa16.54■□□□□ 0.24
SRSF5-213ENST00000556330 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
SRSF5-213ENST00000556330 WIZO95785 1651 aa16.47■□□□□ 0.23
SRSF5-213ENST00000556330 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
SRSF5-213ENST00000556330 EIF4G1Q04637 1599 aaKnown RBP16.44■□□□□ 0.22
SRSF5-213ENST00000556330 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
SRSF5-213ENST00000556330 ATAD2BQ9ULI0 1458 aa16.39■□□□□ 0.21
SRSF5-213ENST00000556330 NCAPD3P42695 1498 aa16.33■□□□□ 0.2
SRSF5-213ENST00000556330 BAZ1BQ9UIG0 1483 aaKnown RBP16.33■□□□□ 0.2
SRSF5-213ENST00000556330 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
SRSF5-213ENST00000556330 SCAF1Q9H7N4 1312 aaKnown RBP16.32■□□□□ 0.2
SRSF5-213ENST00000556330 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
SRSF5-213ENST00000556330 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
SRSF5-213ENST00000556330 KCNA4P22459 653 aa16.15■□□□□ 0.18
SRSF5-213ENST00000556330 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
SRSF5-213ENST00000556330 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
SRSF5-213ENST00000556330 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
SRSF5-213ENST00000556330 CFTRP13569 1480 aa15.92■□□□□ 0.14
SRSF5-213ENST00000556330 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
SRSF5-213ENST00000556330 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
SRSF5-213ENST00000556330 PRDM2Q13029 1718 aa15.83■□□□□ 0.13
SRSF5-213ENST00000556330 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
SRSF5-213ENST00000556330 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
SRSF5-213ENST00000556330 NPM3O75607 178 aaKnown RBP15.78■□□□□ 0.12
SRSF5-213ENST00000556330 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
SRSF5-213ENST00000556330 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
SRSF5-213ENST00000556330 EEA1Q15075 1411 aa15.7■□□□□ 0.1
SRSF5-213ENST00000556330 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
SRSF5-213ENST00000556330 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
SRSF5-213ENST00000556330 FANCD2Q9BXW9 1451 aa15.67■□□□□ 0.1
SRSF5-213ENST00000556330 BIVM-ERCC5R4GMW8 1640 aa15.67■□□□□ 0.1
SRSF5-213ENST00000556330 SYNJ1O43426 1573 aa15.65■□□□□ 0.1
SRSF5-213ENST00000556330 RNF216Q9NWF9 866 aaPredicted RBP15.62■□□□□ 0.09
SRSF5-213ENST00000556330 CEP164Q9UPV0 1460 aa15.61■□□□□ 0.09
SRSF5-213ENST00000556330 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
SRSF5-213ENST00000556330 CUX1P39880 1505 aa15.58■□□□□ 0.09
SRSF5-213ENST00000556330 NESP48681 1621 aa15.57■□□□□ 0.08
SRSF5-213ENST00000556330 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
SRSF5-213ENST00000556330 HOXD11P31277 338 aaPredicted RBP15.49■□□□□ 0.07
SRSF5-213ENST00000556330 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
SRSF5-213ENST00000556330 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
SRSF5-213ENST00000556330 SOGA1O94964 1423 aa15.47■□□□□ 0.07
SRSF5-213ENST00000556330 KIF27Q86VH2 1401 aa15.47■□□□□ 0.07
SRSF5-213ENST00000556330 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
SRSF5-213ENST00000556330 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
SRSF5-213ENST00000556330 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
SRSF5-213ENST00000556330 FAM9AQ8IZU1 332 aaPredicted RBP15.43■□□□□ 0.06
SRSF5-213ENST00000556330 KIF21AQ7Z4S6 1674 aa15.43■□□□□ 0.06
SRSF5-213ENST00000556330 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
SRSF5-213ENST00000556330 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
SRSF5-213ENST00000556330 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
SRSF5-213ENST00000556330 KIF21BO75037 1637 aa15.39■□□□□ 0.05
SRSF5-213ENST00000556330 ABCA10Q8WWZ4 1543 aa15.38■□□□□ 0.05
SRSF5-213ENST00000556330 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
SRSF5-213ENST00000556330 WDR62O43379 1518 aa15.36■□□□□ 0.05
SRSF5-213ENST00000556330 CUX2O14529 1486 aa15.35■□□□□ 0.05
SRSF5-213ENST00000556330 ERICH3Q5RHP9 1530 aa15.34■□□□□ 0.05
SRSF5-213ENST00000556330 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
SRSF5-213ENST00000556330 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
SRSF5-213ENST00000556330 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
SRSF5-213ENST00000556330 TNIKQ9UKE5 1360 aa15.31■□□□□ 0.04
SRSF5-213ENST00000556330 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
SRSF5-213ENST00000556330 IFT140Q96RY7 1462 aa15.28■□□□□ 0.04
SRSF5-213ENST00000556330 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
SRSF5-213ENST00000556330 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
SRSF5-213ENST00000556330 IGF1RP08069 1367 aa15.24■□□□□ 0.03
SRSF5-213ENST00000556330 CUL7Q14999 1698 aa15.24■□□□□ 0.03
SRSF5-213ENST00000556330 TARBP1Q13395 1621 aaKnown RBP15.24■□□□□ 0.03
SRSF5-213ENST00000556330 UBTFP17480 764 aaKnown RBP15.23■□□□□ 0.03
SRSF5-213ENST00000556330 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms