RNA–Protein interactions for RNA: ENST00000573498.5

SRRM2-215, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 994 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-215ENST00000573498 AEBP2Q6ZN18 517 aaPredicted RBP26.95■■□□□ 1.9
SRRM2-215ENST00000573498 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
SRRM2-215ENST00000573498 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
SRRM2-215ENST00000573498 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
SRRM2-215ENST00000573498 FOXD1Q16676 465 aa21.56■■□□□ 1.04
SRRM2-215ENST00000573498 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
SRRM2-215ENST00000573498 MSH5O43196 834 aa20.37■□□□□ 0.85
SRRM2-215ENST00000573498 PIAS4Q8N2W9 510 aaPredicted RBP20.07■□□□□ 0.8
SRRM2-215ENST00000573498 PLPPR3Q6T4P5 718 aa19.88■□□□□ 0.77
SRRM2-215ENST00000573498 PPP6R1Q9UPN7 881 aa19.79■□□□□ 0.76
SRRM2-215ENST00000573498 ADRA2BP18089 450 aa19.73■□□□□ 0.75
SRRM2-215ENST00000573498 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
SRRM2-215ENST00000573498 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
SRRM2-215ENST00000573498 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
SRRM2-215ENST00000573498 CACNB1Q02641 598 aaPredicted RBP17.8■□□□□ 0.44
SRRM2-215ENST00000573498 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
SRRM2-215ENST00000573498 PPP4R3CPQ6ZMV5 832 aa17.36■□□□□ 0.37
SRRM2-215ENST00000573498 HOXD11P31277 338 aaPredicted RBP17.34■□□□□ 0.37
SRRM2-215ENST00000573498 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
SRRM2-215ENST00000573498 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
SRRM2-215ENST00000573498 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
SRRM2-215ENST00000573498 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
SRRM2-215ENST00000573498 DNAJC5BQ9UF47 199 aa16.8■□□□□ 0.28
SRRM2-215ENST00000573498 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.59■□□□□ 0.252e-11■■□□□ 12.2
SRRM2-215ENST00000573498 NCBP3Q53F19 620 aaKnown RBP16.56■□□□□ 0.24
SRRM2-215ENST00000573498 NPM3O75607 178 aaKnown RBP16.31■□□□□ 0.2
SRRM2-215ENST00000573498 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
SRRM2-215ENST00000573498 POTEHQ6S545 545 aa16.13■□□□□ 0.17
SRRM2-215ENST00000573498 CAPN15O75808 1086 aa16.1■□□□□ 0.17
SRRM2-215ENST00000573498 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
SRRM2-215ENST00000573498 DSG3P32926 999 aa16.07■□□□□ 0.16
SRRM2-215ENST00000573498 ABCC9O60706 1549 aa16.06■□□□□ 0.16
SRRM2-215ENST00000573498 NISCHQ9Y2I1 1504 aa15.95■□□□□ 0.14
SRRM2-215ENST00000573498 DNAJC5Q9H3Z4 198 aa15.89■□□□□ 0.13
SRRM2-215ENST00000573498 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
SRRM2-215ENST00000573498 SLC4A2P04920 1241 aa15.69■□□□□ 0.1
SRRM2-215ENST00000573498 ABCB7O75027 752 aa15.68■□□□□ 0.1
SRRM2-215ENST00000573498 APLP2Q06481 763 aa15.67■□□□□ 0.1
SRRM2-215ENST00000573498 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
SRRM2-215ENST00000573498 KCNA4P22459 653 aa15.59■□□□□ 0.09
SRRM2-215ENST00000573498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
SRRM2-215ENST00000573498 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
SRRM2-215ENST00000573498 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
SRRM2-215ENST00000573498 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
SRRM2-215ENST00000573498 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
SRRM2-215ENST00000573498 POLA2Q14181 598 aa15.17■□□□□ 0.02
SRRM2-215ENST00000573498 MYCNP04198 464 aaPredicted RBP15.1■□□□□ 0.01
SRRM2-215ENST00000573498 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
SRRM2-215ENST00000573498 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
SRRM2-215ENST00000573498 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
SRRM2-215ENST00000573498 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
SRRM2-215ENST00000573498 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
SRRM2-215ENST00000573498 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
SRRM2-215ENST00000573498 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
SRRM2-215ENST00000573498 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
SRRM2-215ENST00000573498 RB1CC1Q8TDY2 1594 aa14.75□□□□□ -0.05
SRRM2-215ENST00000573498 OSCARQ8IYS5 282 aa14.72□□□□□ -0.05
SRRM2-215ENST00000573498 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
SRRM2-215ENST00000573498 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
SRRM2-215ENST00000573498 HAX1O00165 279 aa14.64□□□□□ -0.07
SRRM2-215ENST00000573498 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
SRRM2-215ENST00000573498 PITPNM1O00562 1244 aa14.62□□□□□ -0.07
SRRM2-215ENST00000573498 TRIM41Q8WV44 630 aa14.57□□□□□ -0.08
SRRM2-215ENST00000573498 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.081e-13■□□□□ 10.3
SRRM2-215ENST00000573498 CC2D2AQ9P2K1 1620 aa14.46□□□□□ -0.09
SRRM2-215ENST00000573498 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
SRRM2-215ENST00000573498 CUX2O14529 1486 aa14.43□□□□□ -0.1
SRRM2-215ENST00000573498 BICRAQ9NZM4 1560 aa14.39□□□□□ -0.11
SRRM2-215ENST00000573498 EVX2Q03828 476 aa14.38□□□□□ -0.11
SRRM2-215ENST00000573498 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
SRRM2-215ENST00000573498 NACADO15069 1562 aa14.36□□□□□ -0.11
SRRM2-215ENST00000573498 SPDYE2BA6NHP3 402 aa14.32□□□□□ -0.12
SRRM2-215ENST00000573498 SPDYE6P0CI01 402 aa14.32□□□□□ -0.12
SRRM2-215ENST00000573498 SPDYE2Q495Y8 402 aa14.32□□□□□ -0.12
SRRM2-215ENST00000573498 ZBTB22O15209 634 aa14.31□□□□□ -0.12
SRRM2-215ENST00000573498 FBLN2P98095 1184 aa14.28□□□□□ -0.12
SRRM2-215ENST00000573498 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
SRRM2-215ENST00000573498 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
SRRM2-215ENST00000573498 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
SRRM2-215ENST00000573498 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
SRRM2-215ENST00000573498 SPDYE1Q8NFV5 336 aaPredicted RBP14.2□□□□□ -0.14
SRRM2-215ENST00000573498 EIF4G1Q04637 1599 aaKnown RBP14.13□□□□□ -0.15
SRRM2-215ENST00000573498 C19orf67A6NJJ6 358 aa14.12□□□□□ -0.15
SRRM2-215ENST00000573498 SHROOM4Q9ULL8 1493 aa14.12□□□□□ -0.15
SRRM2-215ENST00000573498 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
SRRM2-215ENST00000573498 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
SRRM2-215ENST00000573498 SSUH2Q9Y2M2 353 aa14.06□□□□□ -0.16
SRRM2-215ENST00000573498 GABBR2O75899 941 aa14.04□□□□□ -0.16
SRRM2-215ENST00000573498 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
SRRM2-215ENST00000573498 LHX8Q68G74 356 aa13.97□□□□□ -0.17
SRRM2-215ENST00000573498 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
SRRM2-215ENST00000573498 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
SRRM2-215ENST00000573498 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
SRRM2-215ENST00000573498 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
SRRM2-215ENST00000573498 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
SRRM2-215ENST00000573498 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
SRRM2-215ENST00000573498 POTEIP0CG38 1075 aa13.72□□□□□ -0.21
SRRM2-215ENST00000573498 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
SRRM2-215ENST00000573498 CLCN6P51797 869 aa13.63□□□□□ -0.23
SRRM2-215ENST00000573498 DCBLD2Q96PD2 775 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms