RNA–Protein interactions for RNA: ENST00000532957.5

KCNH2-206, Transcript of potassium voltage-gated channel subfamily H member 2, humanhuman

TSL 2

Gene KCNH2, Length 3,374 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNH2-206ENST00000532957 NISCHQ9Y2I1 1504 aa37.45■■■■□ 3.59
KCNH2-206ENST00000532957 DCAF8L2P0C7V8 631 aa33.15■■■□□ 2.9
KCNH2-206ENST00000532957 SHROOM4Q9ULL8 1493 aa32.82■■■□□ 2.84
KCNH2-206ENST00000532957 SUPT5HO00267 1087 aaKnown RBP31.92■■■□□ 2.7
KCNH2-206ENST00000532957 CCDC180Q9P1Z9 1646 aa31.58■■■□□ 2.65
KCNH2-206ENST00000532957 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
KCNH2-206ENST00000532957 ABCC9O60706 1549 aa31.28■■■□□ 2.6
KCNH2-206ENST00000532957 SCRIBQ14160 1630 aa30.47■■■□□ 2.47
KCNH2-206ENST00000532957 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
KCNH2-206ENST00000532957 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
KCNH2-206ENST00000532957 EHMT2Q96KQ7 1210 aa30.04■■■□□ 2.4
KCNH2-206ENST00000532957 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
KCNH2-206ENST00000532957 PCGF6Q9BYE7 350 aa29.91■■■□□ 2.38
KCNH2-206ENST00000532957 HRCP23327 699 aa29.87■■■□□ 2.37
KCNH2-206ENST00000532957 FAM9AQ8IZU1 332 aaPredicted RBP29.77■■■□□ 2.36
KCNH2-206ENST00000532957 PPARGC1BQ86YN6 1023 aaKnown RBP29.73■■■□□ 2.35
KCNH2-206ENST00000532957 NACADO15069 1562 aa29.71■■■□□ 2.35
KCNH2-206ENST00000532957 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
KCNH2-206ENST00000532957 MYO15BQ96JP2 1530 aa29.67■■■□□ 2.34
KCNH2-206ENST00000532957 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
KCNH2-206ENST00000532957 RB1CC1Q8TDY2 1594 aa29.58■■■□□ 2.33
KCNH2-206ENST00000532957 LOC105371045A0A1W2PR82 267 aa29.55■■■□□ 2.32
KCNH2-206ENST00000532957 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
KCNH2-206ENST00000532957 MROH2BQ7Z745 1585 aa29.32■■■□□ 2.28
KCNH2-206ENST00000532957 WIZO95785 1651 aa29.08■■■□□ 2.25
KCNH2-206ENST00000532957 BAZ1AQ9NRL2 1556 aaPredicted RBP28.8■■■□□ 2.2
KCNH2-206ENST00000532957 UNC13AQ9UPW8 1703 aa28.79■■■□□ 2.2
KCNH2-206ENST00000532957 TTBK1Q5TCY1 1321 aaPredicted RBP28.76■■■□□ 2.19
KCNH2-206ENST00000532957 TRIM26Q12899 539 aaPredicted RBP28.7■■■□□ 2.18
KCNH2-206ENST00000532957 RANGAP1P46060 587 aaPredicted RBP28.69■■■□□ 2.18
KCNH2-206ENST00000532957 BICRAQ9NZM4 1560 aa28.66■■■□□ 2.18
KCNH2-206ENST00000532957 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
KCNH2-206ENST00000532957 CCDC88BA6NC98 1476 aa28.55■■■□□ 2.16
KCNH2-206ENST00000532957 ABCC8Q09428 1581 aa28.46■■■□□ 2.15
KCNH2-206ENST00000532957 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
KCNH2-206ENST00000532957 BAZ1BQ9UIG0 1483 aaKnown RBP28.34■■■□□ 2.13
KCNH2-206ENST00000532957 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
KCNH2-206ENST00000532957 ATAD2BQ9ULI0 1458 aa28.27■■■□□ 2.12
KCNH2-206ENST00000532957 SMARCA2P51531 1590 aa28.22■■■□□ 2.11
KCNH2-206ENST00000532957 PELP1Q8IZL8 1130 aaKnown RBP28.22■■■□□ 2.11
KCNH2-206ENST00000532957 ZEB1P37275 1124 aaPredicted RBP28.17■■■□□ 2.1
KCNH2-206ENST00000532957 SCAF1Q9H7N4 1312 aaKnown RBP28.14■■■□□ 2.1
KCNH2-206ENST00000532957 SOGA1O94964 1423 aa28.13■■■□□ 2.09
KCNH2-206ENST00000532957 RUSC2Q8N2Y8 1516 aa28.02■■■□□ 2.08
KCNH2-206ENST00000532957 CSRNP3Q8WYN3 585 aa28.02■■■□□ 2.08
KCNH2-206ENST00000532957 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
KCNH2-206ENST00000532957 WRNQ14191 1432 aaPredicted RBP eCLIP27.98■■■□□ 2.074e-6■■■□□ 17.8
KCNH2-206ENST00000532957 DNAJC5BQ9UF47 199 aa27.95■■■□□ 2.06
KCNH2-206ENST00000532957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.9■■■□□ 2.06
KCNH2-206ENST00000532957 CCER1Q8TC90 406 aaPredicted RBP27.8■■■□□ 2.04
KCNH2-206ENST00000532957 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
KCNH2-206ENST00000532957 PEG3Q9GZU2 1588 aa27.63■■■□□ 2.01
KCNH2-206ENST00000532957 NEUROD1Q13562 356 aa27.62■■■□□ 2.01
KCNH2-206ENST00000532957 SYNJ1O43426 1573 aa27.62■■■□□ 2.01
KCNH2-206ENST00000532957 ATP1B4Q9UN42 357 aaPredicted RBP27.6■■■□□ 2.01
KCNH2-206ENST00000532957 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2
KCNH2-206ENST00000532957 APLP2Q06481 763 aa27.56■■■□□ 2
KCNH2-206ENST00000532957 CEP162Q5TB80 1403 aa27.55■■■□□ 2
KCNH2-206ENST00000532957 ACIN1Q9UKV3 1341 aaKnown RBP27.53■■■□□ 2
KCNH2-206ENST00000532957 P3H3Q8IVL6 736 aa27.49■■□□□ 1.99
KCNH2-206ENST00000532957 GTF3C3Q9Y5Q9 886 aa27.49■■□□□ 1.99
KCNH2-206ENST00000532957 NESP48681 1621 aa27.47■■□□□ 1.99
KCNH2-206ENST00000532957 DIEXFQ68CQ4 756 aaKnown RBP27.46■■□□□ 1.99
KCNH2-206ENST00000532957 HNRNPUL2Q1KMD3 747 aaKnown RBP27.43■■□□□ 1.98
KCNH2-206ENST00000532957 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
KCNH2-206ENST00000532957 YTHDC1Q96MU7 727 aaKnown RBP27.39■■□□□ 1.98
KCNH2-206ENST00000532957 RAPGEF2Q9Y4G8 1499 aa27.36■■□□□ 1.97
KCNH2-206ENST00000532957 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
KCNH2-206ENST00000532957 GOLGA3Q08378 1498 aa27.35■■□□□ 1.97
KCNH2-206ENST00000532957 CENPBP07199 599 aaPredicted RBP27.33■■□□□ 1.97
KCNH2-206ENST00000532957 TNIKQ9UKE5 1360 aa27.32■■□□□ 1.96
KCNH2-206ENST00000532957 CFTRP13569 1480 aa27.29■■□□□ 1.96
KCNH2-206ENST00000532957 CLIP1P30622 1438 aa27.28■■□□□ 1.96
KCNH2-206ENST00000532957 ITGAEP38570 1179 aa27.28■■□□□ 1.96
KCNH2-206ENST00000532957 EEA1Q15075 1411 aa27.27■■□□□ 1.96
KCNH2-206ENST00000532957 CUX1P39880 1505 aa27.26■■□□□ 1.95
KCNH2-206ENST00000532957 MYT1Q01538 1121 aa27.26■■□□□ 1.95
KCNH2-206ENST00000532957 CUX2O14529 1486 aa27.25■■□□□ 1.95
KCNH2-206ENST00000532957 CEP164Q9UPV0 1460 aa27.22■■□□□ 1.95
KCNH2-206ENST00000532957 FANCD2Q9BXW9 1451 aa27.19■■□□□ 1.94
KCNH2-206ENST00000532957 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
KCNH2-206ENST00000532957 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.94
KCNH2-206ENST00000532957 ARID3CA6NKF2 412 aa27.12■■□□□ 1.93
KCNH2-206ENST00000532957 TDRD9Q8NDG6 1382 aaKnown RBP27.11■■□□□ 1.93
KCNH2-206ENST00000532957 TOP2BQ02880 1626 aa27.09■■□□□ 1.93
KCNH2-206ENST00000532957 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
KCNH2-206ENST00000532957 FBLN2P98095 1184 aa27.01■■□□□ 1.91
KCNH2-206ENST00000532957 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
KCNH2-206ENST00000532957 KANK4Q5T7N3 995 aaPredicted RBP26.95■■□□□ 1.91
KCNH2-206ENST00000532957 IGF1RP08069 1367 aa26.94■■□□□ 1.9
KCNH2-206ENST00000532957 ZNF316A6NFI3 1004 aaPredicted RBP26.92■■□□□ 1.9
KCNH2-206ENST00000532957 MIER1Q8N108 512 aa26.83■■□□□ 1.89
KCNH2-206ENST00000532957 PDS5BQ9NTI5 1447 aa26.81■■□□□ 1.88
KCNH2-206ENST00000532957 VPS8Q8N3P4 1428 aa26.8■■□□□ 1.88
KCNH2-206ENST00000532957 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
KCNH2-206ENST00000532957 POLA1P09884 1462 aaPredicted RBP26.78■■□□□ 1.88
KCNH2-206ENST00000532957 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
KCNH2-206ENST00000532957 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
KCNH2-206ENST00000532957 FAM50AQ14320 339 aaKnown RBP26.77■■□□□ 1.88
KCNH2-206ENST00000532957 KIF21BO75037 1637 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms