RNA–Protein interactions for RNA: ENST00000572952.1

SRRM2-212, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 1,118 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-212ENST00000572952 NISCHQ9Y2I1 1504 aa33.9■■■■□ 3.02
SRRM2-212ENST00000572952 ABCC9O60706 1549 aa31.18■■■□□ 2.58
SRRM2-212ENST00000572952 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
SRRM2-212ENST00000572952 DNAJC5BQ9UF47 199 aa29.57■■■□□ 2.32
SRRM2-212ENST00000572952 RB1CC1Q8TDY2 1594 aa29.47■■■□□ 2.31
SRRM2-212ENST00000572952 NACADO15069 1562 aa29.11■■■□□ 2.25
SRRM2-212ENST00000572952 UNC13AQ9UPW8 1703 aa29.05■■■□□ 2.24
SRRM2-212ENST00000572952 PABPN1Q86U42 306 aaKnown RBP eCLIP28.83■■■□□ 2.21
SRRM2-212ENST00000572952 BICRAQ9NZM4 1560 aa28.68■■■□□ 2.18
SRRM2-212ENST00000572952 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
SRRM2-212ENST00000572952 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
SRRM2-212ENST00000572952 CC2D2AQ9P2K1 1620 aa28.2■■■□□ 2.1
SRRM2-212ENST00000572952 SHROOM4Q9ULL8 1493 aa28.15■■■□□ 2.1
SRRM2-212ENST00000572952 CECR2Q9BXF3 1484 aa28.1■■■□□ 2.09
SRRM2-212ENST00000572952 ZCCHC6Q5VYS8 1495 aaKnown RBP28.04■■■□□ 2.08
SRRM2-212ENST00000572952 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
SRRM2-212ENST00000572952 EIF4G1Q04637 1599 aaKnown RBP27.99■■■□□ 2.07
SRRM2-212ENST00000572952 DCAF1Q9Y4B6 1507 aa27.96■■■□□ 2.07
SRRM2-212ENST00000572952 DNAJC5Q9H3Z4 198 aa27.47■■□□□ 1.99
SRRM2-212ENST00000572952 CUX2O14529 1486 aa27.05■■□□□ 1.92
SRRM2-212ENST00000572952 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
SRRM2-212ENST00000572952 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
SRRM2-212ENST00000572952 ATAD2BQ9ULI0 1458 aa26.69■■□□□ 1.86
SRRM2-212ENST00000572952 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
SRRM2-212ENST00000572952 NESP48681 1621 aa26.66■■□□□ 1.86
SRRM2-212ENST00000572952 SMARCA4P51532 1647 aa26.66■■□□□ 1.86
SRRM2-212ENST00000572952 SMARCA2P51531 1590 aa26.63■■□□□ 1.85
SRRM2-212ENST00000572952 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
SRRM2-212ENST00000572952 KIF21AQ7Z4S6 1674 aa26.46■■□□□ 1.83
SRRM2-212ENST00000572952 BAZ1BQ9UIG0 1483 aaKnown RBP26.45■■□□□ 1.82
SRRM2-212ENST00000572952 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
SRRM2-212ENST00000572952 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
SRRM2-212ENST00000572952 PEG3Q9GZU2 1588 aa26.35■■□□□ 1.81
SRRM2-212ENST00000572952 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
SRRM2-212ENST00000572952 TRIM41Q8WV44 630 aa26.14■■□□□ 1.78
SRRM2-212ENST00000572952 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.77
SRRM2-212ENST00000572952 MRC2Q9UBG0 1479 aa26.04■■□□□ 1.76
SRRM2-212ENST00000572952 WDR62O43379 1518 aa26.04■■□□□ 1.76
SRRM2-212ENST00000572952 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
SRRM2-212ENST00000572952 WIZO95785 1651 aa25.9■■□□□ 1.74
SRRM2-212ENST00000572952 CEP164Q9UPV0 1460 aa25.83■■□□□ 1.73
SRRM2-212ENST00000572952 FANCD2Q9BXW9 1451 aa25.73■■□□□ 1.71
SRRM2-212ENST00000572952 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
SRRM2-212ENST00000572952 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
SRRM2-212ENST00000572952 CFTRP13569 1480 aa25.59■■□□□ 1.69
SRRM2-212ENST00000572952 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
SRRM2-212ENST00000572952 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
SRRM2-212ENST00000572952 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
SRRM2-212ENST00000572952 OSCARQ8IYS5 282 aa25.57■■□□□ 1.68
SRRM2-212ENST00000572952 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
SRRM2-212ENST00000572952 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
SRRM2-212ENST00000572952 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
SRRM2-212ENST00000572952 RSF1Q96T23 1441 aaPredicted RBP25.35■■□□□ 1.65
SRRM2-212ENST00000572952 EIF4G3O43432 1585 aaKnown RBP25.3■■□□□ 1.64
SRRM2-212ENST00000572952 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
SRRM2-212ENST00000572952 CHD1O14646 1710 aa25.29■■□□□ 1.64
SRRM2-212ENST00000572952 TOPBP1Q92547 1522 aa25.22■■□□□ 1.63
SRRM2-212ENST00000572952 CCDC88BA6NC98 1476 aa25.12■■□□□ 1.61
SRRM2-212ENST00000572952 DNMBPQ6XZF7 1577 aa25.12■■□□□ 1.61
SRRM2-212ENST00000572952 TARBP1Q13395 1621 aaKnown RBP25.09■■□□□ 1.61
SRRM2-212ENST00000572952 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
SRRM2-212ENST00000572952 CYB5RLQ6IPT4 315 aa25.04■■□□□ 1.6
SRRM2-212ENST00000572952 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
SRRM2-212ENST00000572952 AQRO60306 1485 aaKnown RBP eCLIP25■■□□□ 1.591e-11■■□□□ 12.9
SRRM2-212ENST00000572952 TRHP20396 242 aaPredicted RBP24.94■■□□□ 1.58
SRRM2-212ENST00000572952 POLA1P09884 1462 aaPredicted RBP24.91■■□□□ 1.58
SRRM2-212ENST00000572952 FBLN2P98095 1184 aa24.86■■□□□ 1.57
SRRM2-212ENST00000572952 CLASP1Q7Z460 1538 aa24.85■■□□□ 1.57
SRRM2-212ENST00000572952 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.56
SRRM2-212ENST00000572952 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
SRRM2-212ENST00000572952 WDR97A6NE52 1622 aa24.77■■□□□ 1.56
SRRM2-212ENST00000572952 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
SRRM2-212ENST00000572952 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
SRRM2-212ENST00000572952 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.55
SRRM2-212ENST00000572952 SOGA1O94964 1423 aa24.7■■□□□ 1.55
SRRM2-212ENST00000572952 PBRM1Q86U86 1689 aa24.7■■□□□ 1.54
SRRM2-212ENST00000572952 MAGI1Q96QZ7 1491 aaPredicted RBP24.67■■□□□ 1.54
SRRM2-212ENST00000572952 CUX1P39880 1505 aa24.63■■□□□ 1.53
SRRM2-212ENST00000572952 SYNJ2O15056 1496 aa24.59■■□□□ 1.53
SRRM2-212ENST00000572952 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
SRRM2-212ENST00000572952 AEBP2Q6ZN18 517 aaPredicted RBP24.57■■□□□ 1.52
SRRM2-212ENST00000572952 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
SRRM2-212ENST00000572952 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
SRRM2-212ENST00000572952 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
SRRM2-212ENST00000572952 ERCC6L2Q5T890 1561 aa24.45■■□□□ 1.5
SRRM2-212ENST00000572952 ABCA10Q8WWZ4 1543 aa24.36■■□□□ 1.49
SRRM2-212ENST00000572952 KIF13AQ9H1H9 1805 aa24.36■■□□□ 1.49
SRRM2-212ENST00000572952 ADAMTS12P58397 1594 aa24.35■■□□□ 1.49
SRRM2-212ENST00000572952 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
SRRM2-212ENST00000572952 GRIN2AQ12879 1464 aa24.32■■□□□ 1.48
SRRM2-212ENST00000572952 SHROOM2Q13796 1616 aa24.29■■□□□ 1.48
SRRM2-212ENST00000572952 NUP160Q12769 1436 aa24.24■■□□□ 1.47
SRRM2-212ENST00000572952 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
SRRM2-212ENST00000572952 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
SRRM2-212ENST00000572952 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
SRRM2-212ENST00000572952 FHAD1B1AJZ9 1412 aa24.09■■□□□ 1.45
SRRM2-212ENST00000572952 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
SRRM2-212ENST00000572952 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
SRRM2-212ENST00000572952 PRG4Q92954 1404 aaPredicted RBP24.01■■□□□ 1.43
SRRM2-212ENST00000572952 DIP2BQ9P265 1576 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms