RNA–Protein interactions for RNA: ENST00000572278.1

SRRM2-209, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 2

Gene SRRM2, Length 711 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-209ENST00000572278 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
SRRM2-209ENST00000572278 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
SRRM2-209ENST00000572278 NISCHQ9Y2I1 1504 aa21.98■■□□□ 1.11
SRRM2-209ENST00000572278 PHF23Q9BUL5 403 aaPredicted RBP20.56■□□□□ 0.88
SRRM2-209ENST00000572278 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
SRRM2-209ENST00000572278 CCDC180Q9P1Z9 1646 aa19.23■□□□□ 0.67
SRRM2-209ENST00000572278 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
SRRM2-209ENST00000572278 FOXD1Q16676 465 aa18.97■□□□□ 0.63
SRRM2-209ENST00000572278 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
SRRM2-209ENST00000572278 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
SRRM2-209ENST00000572278 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
SRRM2-209ENST00000572278 ADRA2BP18089 450 aa18.15■□□□□ 0.5
SRRM2-209ENST00000572278 ABCC9O60706 1549 aa18.02■□□□□ 0.47
SRRM2-209ENST00000572278 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
SRRM2-209ENST00000572278 DCAF8L2P0C7V8 631 aa17.92■□□□□ 0.46
SRRM2-209ENST00000572278 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
SRRM2-209ENST00000572278 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
SRRM2-209ENST00000572278 NACADO15069 1562 aa17.83■□□□□ 0.44
SRRM2-209ENST00000572278 RB1CC1Q8TDY2 1594 aa17.63■□□□□ 0.41
SRRM2-209ENST00000572278 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
SRRM2-209ENST00000572278 SCRIBQ14160 1630 aa17.57■□□□□ 0.4
SRRM2-209ENST00000572278 MSH5O43196 834 aa17.56■□□□□ 0.4
SRRM2-209ENST00000572278 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.37
SRRM2-209ENST00000572278 SUPT5HO00267 1087 aaKnown RBP17.24■□□□□ 0.35
SRRM2-209ENST00000572278 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
SRRM2-209ENST00000572278 BICRAQ9NZM4 1560 aa17.05■□□□□ 0.32
SRRM2-209ENST00000572278 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
SRRM2-209ENST00000572278 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
SRRM2-209ENST00000572278 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
SRRM2-209ENST00000572278 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
SRRM2-209ENST00000572278 WIZO95785 1651 aa16.85■□□□□ 0.29
SRRM2-209ENST00000572278 PABPN1Q86U42 306 aaKnown RBP eCLIP16.8■□□□□ 0.28
SRRM2-209ENST00000572278 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
SRRM2-209ENST00000572278 PPP4R3CPQ6ZMV5 832 aa16.72■□□□□ 0.27
SRRM2-209ENST00000572278 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
SRRM2-209ENST00000572278 SCAF1Q9H7N4 1312 aaKnown RBP16.66■□□□□ 0.26
SRRM2-209ENST00000572278 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
SRRM2-209ENST00000572278 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
SRRM2-209ENST00000572278 ATAD2BQ9ULI0 1458 aa16.54■□□□□ 0.24
SRRM2-209ENST00000572278 EIF4G1Q04637 1599 aaKnown RBP16.53■□□□□ 0.24
SRRM2-209ENST00000572278 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
SRRM2-209ENST00000572278 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
SRRM2-209ENST00000572278 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
SRRM2-209ENST00000572278 HMGXB3Q12766 1538 aa16.45■□□□□ 0.22
SRRM2-209ENST00000572278 NCAPD3P42695 1498 aa16.4■□□□□ 0.22
SRRM2-209ENST00000572278 DMRT2Q9Y5R5 561 aa16.3■□□□□ 0.2
SRRM2-209ENST00000572278 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
SRRM2-209ENST00000572278 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
SRRM2-209ENST00000572278 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
SRRM2-209ENST00000572278 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
SRRM2-209ENST00000572278 KCNA4P22459 653 aa16.21■□□□□ 0.19
SRRM2-209ENST00000572278 PRDM2Q13029 1718 aa16.16■□□□□ 0.18
SRRM2-209ENST00000572278 ABCC8Q09428 1581 aa16.16■□□□□ 0.18
SRRM2-209ENST00000572278 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
SRRM2-209ENST00000572278 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
SRRM2-209ENST00000572278 CFTRP13569 1480 aa16.06■□□□□ 0.16
SRRM2-209ENST00000572278 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
SRRM2-209ENST00000572278 SYNJ1O43426 1573 aa16■□□□□ 0.15
SRRM2-209ENST00000572278 NPM3O75607 178 aaKnown RBP16■□□□□ 0.15
SRRM2-209ENST00000572278 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
SRRM2-209ENST00000572278 TOP2BQ02880 1626 aa15.98■□□□□ 0.15
SRRM2-209ENST00000572278 EEA1Q15075 1411 aa15.98■□□□□ 0.15
SRRM2-209ENST00000572278 RNF216Q9NWF9 866 aaPredicted RBP15.97■□□□□ 0.15
SRRM2-209ENST00000572278 CADPSQ9ULU8 1353 aa15.96■□□□□ 0.15
SRRM2-209ENST00000572278 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
SRRM2-209ENST00000572278 LOC105371045A0A1W2PR82 267 aa15.92■□□□□ 0.14
SRRM2-209ENST00000572278 FAM9AQ8IZU1 332 aaPredicted RBP15.88■□□□□ 0.13
SRRM2-209ENST00000572278 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
SRRM2-209ENST00000572278 CUX1P39880 1505 aa15.85■□□□□ 0.13
SRRM2-209ENST00000572278 SOGA1O94964 1423 aa15.85■□□□□ 0.13
SRRM2-209ENST00000572278 CUX2O14529 1486 aa15.82■□□□□ 0.12
SRRM2-209ENST00000572278 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
SRRM2-209ENST00000572278 KIF21BO75037 1637 aa15.78■□□□□ 0.12
SRRM2-209ENST00000572278 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
SRRM2-209ENST00000572278 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.11
SRRM2-209ENST00000572278 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
SRRM2-209ENST00000572278 GOLGA3Q08378 1498 aa15.72■□□□□ 0.11
SRRM2-209ENST00000572278 NESP48681 1621 aa15.72■□□□□ 0.11
SRRM2-209ENST00000572278 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
SRRM2-209ENST00000572278 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
SRRM2-209ENST00000572278 TNIKQ9UKE5 1360 aa15.68■□□□□ 0.1
SRRM2-209ENST00000572278 MYT1Q01538 1121 aa15.67■□□□□ 0.1
SRRM2-209ENST00000572278 KIF27Q86VH2 1401 aa15.67■□□□□ 0.1
SRRM2-209ENST00000572278 KIF21AQ7Z4S6 1674 aa15.66■□□□□ 0.1
SRRM2-209ENST00000572278 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
SRRM2-209ENST00000572278 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
SRRM2-209ENST00000572278 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
SRRM2-209ENST00000572278 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
SRRM2-209ENST00000572278 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
SRRM2-209ENST00000572278 EHMT2Q96KQ7 1210 aa15.59■□□□□ 0.09
SRRM2-209ENST00000572278 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
SRRM2-209ENST00000572278 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
SRRM2-209ENST00000572278 POLA1P09884 1462 aaPredicted RBP15.57■□□□□ 0.08
SRRM2-209ENST00000572278 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
SRRM2-209ENST00000572278 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
SRRM2-209ENST00000572278 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
SRRM2-209ENST00000572278 RAPGEF2Q9Y4G8 1499 aa15.55■□□□□ 0.08
SRRM2-209ENST00000572278 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
SRRM2-209ENST00000572278 TTBK1Q5TCY1 1321 aaPredicted RBP15.49■□□□□ 0.07
SRRM2-209ENST00000572278 MRC2Q9UBG0 1479 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms