Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.48■□□□□ 0.71
CCNFP41002 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCNFP41002 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.48■□□□□ 0.71
CCNFP41002 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CCNFP41002 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCNFP41002 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.47■□□□□ 0.71
CCNFP41002 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.47■□□□□ 0.71
CCNFP41002 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.47■□□□□ 0.71
CCNFP41002 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.47■□□□□ 0.71
CCNFP41002 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CCNFP41002 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.47■□□□□ 0.71
CCNFP41002 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.47■□□□□ 0.71
CCNFP41002 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCNFP41002 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNFP41002 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCNFP41002 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.46■□□□□ 0.71
CCNFP41002 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCNFP41002 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 AC141586.3-201ENST00000562166 1838 ntBASIC19.46■□□□□ 0.71
CCNFP41002 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNFP41002 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCNFP41002 TEX21P-204ENST00000641479 1693 ntBASIC19.46■□□□□ 0.71
CCNFP41002 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCNFP41002 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCNFP41002 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
CCNFP41002 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNFP41002 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNFP41002 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCNFP41002 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCNFP41002 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 AC018553.1-201ENST00000616682 1458 ntBASIC19.45■□□□□ 0.7
CCNFP41002 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNFP41002 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNFP41002 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNFP41002 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNFP41002 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CCNFP41002 AC116351.2-201ENST00000606540 1585 ntBASIC19.44■□□□□ 0.7
CCNFP41002 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
CCNFP41002 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNFP41002 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms