Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RN7SL597P-201ENST00000491551 296 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC091965.1-201ENST00000512406 440 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NT5CP2-201ENST00000553305 561 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC005209.1-201ENST00000579621 289 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 Metazoa_SRP.160-201ENST00000622203 277 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL669831.6-201ENST00000635557 837 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 CARS-216ENST00000639317 135 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 GNG14-202ENST00000640151 425 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 HAL-201ENST00000261208 3913 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 PTK2B-210ENST00000517339 3914 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 WASHC2A-204ENST00000399339 4323 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AC005077.4-201ENST00000421546 3495 ntBASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 CDC42SE1-202ENST00000439374 3498 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 VIPAS39-201ENST00000327028 2614 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NTRK3-220ENST00000626019 2741 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 RAD50-201ENST00000378823 8306 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 RACGAP1-209ENST00000547905 2190 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 C1orf226-203ENST00000458626 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
KRTAP3-3Q9BYR6 ZDHHC11B-202ENST00000508859 1631 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 MAPKBP1-201ENST00000456763 7158 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 NSUN7-201ENST00000316607 3546 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 Z82186.1-201ENST00000434707 4364 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 LGALS8-219ENST00000526589 6420 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 KIAA1671-201ENST00000358431 10490 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 FGF5-203ENST00000456523 5234 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 STK36-207ENST00000440309 4721 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AR-203ENST00000396044 10221 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 LPIN3-205ENST00000632009 4132 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 SIDT2-203ENST00000431081 3910 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU4-32P-201ENST00000363404 141 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU1-100P-201ENST00000365255 165 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 RNU6-471P-201ENST00000383944 106 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 Y_RNA.609-201ENST00000410669 89 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 IGKV3D-15-201ENST00000417279 396 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AKR1B1P1-201ENST00000429105 956 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 SNRPEP9-201ENST00000436794 238 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 LRTOMT-208ENST00000439209 801 ntTSL 3 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 TUBBP2-201ENST00000454403 411 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL702P-201ENST00000488394 292 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AC145098.1-201ENST00000506025 434 ntTSL 3 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AC023794.3-204ENST00000510754 236 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AC134684.1-201ENST00000533883 264 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AP000757.1-201ENST00000534150 959 ntTSL 2 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 PEX11A-203ENST00000559170 905 ntTSL 2 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 DNM1P38-201ENST00000560794 433 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 FKBP1AP2-201ENST00000560953 283 ntBASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC4.97□□□□□ -1.61
KRTAP3-3Q9BYR6 AC140658.3-201ENST00000567603 271 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms