RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
TRIM16-201ENST00000336708 CCDC180Q9P1Z9 1646 aa18.34■□□□□ 0.53
TRIM16-201ENST00000336708 ZCCHC6Q5VYS8 1495 aaKnown RBP17.93■□□□□ 0.46
TRIM16-201ENST00000336708 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
TRIM16-201ENST00000336708 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
TRIM16-201ENST00000336708 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
TRIM16-201ENST00000336708 DCAF8L2P0C7V8 631 aa17.17■□□□□ 0.34
TRIM16-201ENST00000336708 ABCC9O60706 1549 aa17.05■□□□□ 0.32
TRIM16-201ENST00000336708 SUPT5HO00267 1087 aaKnown RBP17.02■□□□□ 0.32
TRIM16-201ENST00000336708 NACADO15069 1562 aa16.93■□□□□ 0.3
TRIM16-201ENST00000336708 SCRIBQ14160 1630 aa16.86■□□□□ 0.29
TRIM16-201ENST00000336708 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
TRIM16-201ENST00000336708 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
TRIM16-201ENST00000336708 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
TRIM16-201ENST00000336708 UNC13AQ9UPW8 1703 aa16.46■□□□□ 0.23
TRIM16-201ENST00000336708 CECR2Q9BXF3 1484 aa16.44■□□□□ 0.22
TRIM16-201ENST00000336708 MROH2BQ7Z745 1585 aa16.41■□□□□ 0.22
TRIM16-201ENST00000336708 BAZ1AQ9NRL2 1556 aaPredicted RBP16.33■□□□□ 0.2
TRIM16-201ENST00000336708 WIZO95785 1651 aa16.31■□□□□ 0.2
TRIM16-201ENST00000336708 BICRAQ9NZM4 1560 aa16.24■□□□□ 0.19
TRIM16-201ENST00000336708 SMARCA4P51532 1647 aa16.23■□□□□ 0.19
TRIM16-201ENST00000336708 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
TRIM16-201ENST00000336708 EIF4G1Q04637 1599 aaKnown RBP16.15■□□□□ 0.18
TRIM16-201ENST00000336708 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
TRIM16-201ENST00000336708 SMARCA2P51531 1590 aa16.02■□□□□ 0.16
TRIM16-201ENST00000336708 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRIM16-201ENST00000336708 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
TRIM16-201ENST00000336708 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
TRIM16-201ENST00000336708 LOC105371045A0A1W2PR82 267 aa15.96■□□□□ 0.15
TRIM16-201ENST00000336708 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
TRIM16-201ENST00000336708 ABCC8Q09428 1581 aa15.77■□□□□ 0.12
TRIM16-201ENST00000336708 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
TRIM16-201ENST00000336708 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
TRIM16-201ENST00000336708 PCGF6Q9BYE7 350 aa15.66■□□□□ 0.1
TRIM16-201ENST00000336708 HMGXB3Q12766 1538 aa15.66■□□□□ 0.1
TRIM16-201ENST00000336708 HRCP23327 699 aa15.63■□□□□ 0.09
TRIM16-201ENST00000336708 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
TRIM16-201ENST00000336708 EEA1Q15075 1411 aa15.61■□□□□ 0.09
TRIM16-201ENST00000336708 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
TRIM16-201ENST00000336708 WRNQ14191 1432 aaPredicted RBP eCLIP15.59■□□□□ 0.09
TRIM16-201ENST00000336708 TRIM26Q12899 539 aaPredicted RBP15.59■□□□□ 0.09
TRIM16-201ENST00000336708 SYNJ1O43426 1573 aa15.57■□□□□ 0.08
TRIM16-201ENST00000336708 SOGA1O94964 1423 aa15.55■□□□□ 0.08
TRIM16-201ENST00000336708 CC2D2AQ9P2K1 1620 aa15.49■□□□□ 0.07
TRIM16-201ENST00000336708 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
TRIM16-201ENST00000336708 BIVM-ERCC5R4GMW8 1640 aa15.49■□□□□ 0.07
TRIM16-201ENST00000336708 TOP2BQ02880 1626 aa15.48■□□□□ 0.07
TRIM16-201ENST00000336708 TNIKQ9UKE5 1360 aa15.46■□□□□ 0.06
TRIM16-201ENST00000336708 KIF21BO75037 1637 aa15.45■□□□□ 0.06
TRIM16-201ENST00000336708 PRDM2Q13029 1718 aa15.44■□□□□ 0.06
TRIM16-201ENST00000336708 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
TRIM16-201ENST00000336708 GOLGA3Q08378 1498 aa15.41■□□□□ 0.06
TRIM16-201ENST00000336708 EHMT2Q96KQ7 1210 aa15.4■□□□□ 0.06
TRIM16-201ENST00000336708 CFTRP13569 1480 aa15.4■□□□□ 0.06
TRIM16-201ENST00000336708 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
TRIM16-201ENST00000336708 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
TRIM16-201ENST00000336708 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
TRIM16-201ENST00000336708 CUX1P39880 1505 aa15.32■□□□□ 0.04
TRIM16-201ENST00000336708 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
TRIM16-201ENST00000336708 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
TRIM16-201ENST00000336708 RAPGEF2Q9Y4G8 1499 aa15.22■□□□□ 0.03
TRIM16-201ENST00000336708 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.03
TRIM16-201ENST00000336708 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
TRIM16-201ENST00000336708 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
TRIM16-201ENST00000336708 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
TRIM16-201ENST00000336708 CLIP1P30622 1438 aa15.15■□□□□ 0.02
TRIM16-201ENST00000336708 KIF27Q86VH2 1401 aa15.14■□□□□ 0.01
TRIM16-201ENST00000336708 VPS8Q8N3P4 1428 aa15.11■□□□□ 0.01
TRIM16-201ENST00000336708 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
TRIM16-201ENST00000336708 FANCD2Q9BXW9 1451 aa15.05■□□□□ 0
TRIM16-201ENST00000336708 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
TRIM16-201ENST00000336708 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
TRIM16-201ENST00000336708 LAMC3Q9Y6N6 1575 aa15.03■□□□□ -0
TRIM16-201ENST00000336708 ARAP1Q96P48 1450 aa15.02□□□□□ -0.01
TRIM16-201ENST00000336708 CUX2O14529 1486 aa15□□□□□ -0.01
TRIM16-201ENST00000336708 IGF1RP08069 1367 aa14.99□□□□□ -0.01
TRIM16-201ENST00000336708 NESP48681 1621 aa14.97□□□□□ -0.01
TRIM16-201ENST00000336708 TOPBP1Q92547 1522 aa14.96□□□□□ -0.01
TRIM16-201ENST00000336708 ABCA10Q8WWZ4 1543 aa14.95□□□□□ -0.02
TRIM16-201ENST00000336708 WDR97A6NE52 1622 aa14.94□□□□□ -0.02
TRIM16-201ENST00000336708 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
TRIM16-201ENST00000336708 ARHGAP35Q9NRY4 1499 aa14.92□□□□□ -0.02
TRIM16-201ENST00000336708 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
TRIM16-201ENST00000336708 CUL7Q14999 1698 aa14.88□□□□□ -0.03
TRIM16-201ENST00000336708 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
TRIM16-201ENST00000336708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
TRIM16-201ENST00000336708 TTBK1Q5TCY1 1321 aaPredicted RBP14.87□□□□□ -0.03
TRIM16-201ENST00000336708 RAD54L2Q9Y4B4 1467 aa14.86□□□□□ -0.03
TRIM16-201ENST00000336708 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
TRIM16-201ENST00000336708 CCER1Q8TC90 406 aaPredicted RBP14.84□□□□□ -0.03
TRIM16-201ENST00000336708 APLP2Q06481 763 aa14.83□□□□□ -0.03
TRIM16-201ENST00000336708 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.03
TRIM16-201ENST00000336708 MAP3K1Q13233 1512 aa14.83□□□□□ -0.04
TRIM16-201ENST00000336708 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
TRIM16-201ENST00000336708 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
TRIM16-201ENST00000336708 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
TRIM16-201ENST00000336708 MYT1Q01538 1121 aa14.79□□□□□ -0.04
TRIM16-201ENST00000336708 RRBP1Q9P2E9 1410 aaKnown RBP14.77□□□□□ -0.05
TRIM16-201ENST00000336708 EFCAB5A4FU69 1503 aa14.76□□□□□ -0.05
TRIM16-201ENST00000336708 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms