RNA–Protein interactions for RNA: ENST00000347644.7

SLC28A2-201, Transcript of solute carrier family 28 member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A2, Length 4,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2-201ENST00000347644 NISCHQ9Y2I1 1504 aa17.54■□□□□ 0.4
SLC28A2-201ENST00000347644 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
SLC28A2-201ENST00000347644 ABCC9O60706 1549 aa15.91■□□□□ 0.14
SLC28A2-201ENST00000347644 CCDC180Q9P1Z9 1646 aa15.91■□□□□ 0.14
SLC28A2-201ENST00000347644 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
SLC28A2-201ENST00000347644 SHROOM4Q9ULL8 1493 aa15.17■□□□□ 0.02
SLC28A2-201ENST00000347644 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
SLC28A2-201ENST00000347644 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
SLC28A2-201ENST00000347644 SUPT5HO00267 1087 aaKnown RBP14.78□□□□□ -0.04
SLC28A2-201ENST00000347644 NACADO15069 1562 aa14.7□□□□□ -0.06
SLC28A2-201ENST00000347644 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
SLC28A2-201ENST00000347644 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
SLC28A2-201ENST00000347644 ZCCHC6Q5VYS8 1495 aaKnown RBP14.62□□□□□ -0.07
SLC28A2-201ENST00000347644 SCRIBQ14160 1630 aa14.57□□□□□ -0.08
SLC28A2-201ENST00000347644 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
SLC28A2-201ENST00000347644 BICRAQ9NZM4 1560 aa14.31□□□□□ -0.12
SLC28A2-201ENST00000347644 ERCC6Q03468 1493 aa14.23□□□□□ -0.13
SLC28A2-201ENST00000347644 CECR2Q9BXF3 1484 aa14.22□□□□□ -0.13
SLC28A2-201ENST00000347644 FBLN2P98095 1184 aa14.18□□□□□ -0.14
SLC28A2-201ENST00000347644 DNAJC5BQ9UF47 199 aa14.12□□□□□ -0.15
SLC28A2-201ENST00000347644 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
SLC28A2-201ENST00000347644 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
SLC28A2-201ENST00000347644 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
SLC28A2-201ENST00000347644 TRIM41Q8WV44 630 aa13.9□□□□□ -0.19
SLC28A2-201ENST00000347644 RANGAP1P46060 587 aaPredicted RBP13.87□□□□□ -0.19
SLC28A2-201ENST00000347644 PDS5BQ9NTI5 1447 aa13.85□□□□□ -0.19
SLC28A2-201ENST00000347644 ATP1B4Q9UN42 357 aaPredicted RBP13.85□□□□□ -0.19
SLC28A2-201ENST00000347644 BAZ1AQ9NRL2 1556 aaPredicted RBP13.81□□□□□ -0.2
SLC28A2-201ENST00000347644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.81□□□□□ -0.2
SLC28A2-201ENST00000347644 HNRNPUL2Q1KMD3 747 aaKnown RBP13.81□□□□□ -0.2
SLC28A2-201ENST00000347644 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
SLC28A2-201ENST00000347644 NPM1P06748 294 aaKnown RBP eCLIP13.81□□□□□ -0.2
SLC28A2-201ENST00000347644 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
SLC28A2-201ENST00000347644 CHMP7Q8WUX9 453 aaPredicted RBP13.79□□□□□ -0.2
SLC28A2-201ENST00000347644 APLP2Q06481 763 aa13.75□□□□□ -0.21
SLC28A2-201ENST00000347644 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
SLC28A2-201ENST00000347644 PEG3Q9GZU2 1588 aa13.73□□□□□ -0.21
SLC28A2-201ENST00000347644 CC2D2AQ9P2K1 1620 aa13.73□□□□□ -0.21
SLC28A2-201ENST00000347644 MYT1LQ9UL68 1186 aa13.72□□□□□ -0.21
SLC28A2-201ENST00000347644 UBTFP17480 764 aaKnown RBP13.71□□□□□ -0.21
SLC28A2-201ENST00000347644 ATAD2BQ9ULI0 1458 aa13.66□□□□□ -0.22
SLC28A2-201ENST00000347644 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
SLC28A2-201ENST00000347644 OSCARQ8IYS5 282 aa13.62□□□□□ -0.23
SLC28A2-201ENST00000347644 NCAPD3P42695 1498 aa13.59□□□□□ -0.23
SLC28A2-201ENST00000347644 RSF1Q96T23 1441 aaPredicted RBP13.55□□□□□ -0.24
SLC28A2-201ENST00000347644 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
SLC28A2-201ENST00000347644 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
SLC28A2-201ENST00000347644 HMGXB3Q12766 1538 aa13.46□□□□□ -0.25
SLC28A2-201ENST00000347644 SMARCA4P51532 1647 aa13.46□□□□□ -0.25
SLC28A2-201ENST00000347644 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
SLC28A2-201ENST00000347644 FANCD2Q9BXW9 1451 aa13.4□□□□□ -0.26
SLC28A2-201ENST00000347644 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
SLC28A2-201ENST00000347644 AEBP2Q6ZN18 517 aaPredicted RBP13.4□□□□□ -0.26
SLC28A2-201ENST00000347644 NESP48681 1621 aa13.34□□□□□ -0.27
SLC28A2-201ENST00000347644 SOGA1O94964 1423 aa13.33□□□□□ -0.28
SLC28A2-201ENST00000347644 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
SLC28A2-201ENST00000347644 ESF1Q9H501 851 aaKnown RBP13.32□□□□□ -0.28
SLC28A2-201ENST00000347644 ABCC8Q09428 1581 aa13.31□□□□□ -0.28
SLC28A2-201ENST00000347644 ARID3CA6NKF2 412 aa13.31□□□□□ -0.28
SLC28A2-201ENST00000347644 MRC2Q9UBG0 1479 aa13.3□□□□□ -0.28
SLC28A2-201ENST00000347644 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.28
SLC28A2-201ENST00000347644 P3H3Q8IVL6 736 aa13.29□□□□□ -0.28
SLC28A2-201ENST00000347644 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
SLC28A2-201ENST00000347644 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
SLC28A2-201ENST00000347644 TOP2AP11388 1531 aaKnown RBP13.25□□□□□ -0.29
SLC28A2-201ENST00000347644 CUX2O14529 1486 aa13.23□□□□□ -0.29
SLC28A2-201ENST00000347644 PLPPR3Q6T4P5 718 aa13.22□□□□□ -0.29
SLC28A2-201ENST00000347644 WIZO95785 1651 aa13.22□□□□□ -0.29
SLC28A2-201ENST00000347644 DNAJC5Q9H3Z4 198 aa13.2□□□□□ -0.3
SLC28A2-201ENST00000347644 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
SLC28A2-201ENST00000347644 KCNH8Q96L42 1107 aa13.2□□□□□ -0.3
SLC28A2-201ENST00000347644 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
SLC28A2-201ENST00000347644 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
SLC28A2-201ENST00000347644 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
SLC28A2-201ENST00000347644 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
SLC28A2-201ENST00000347644 ARID4BQ4LE39 1312 aaPredicted RBP13.15□□□□□ -0.3
SLC28A2-201ENST00000347644 CFTRP13569 1480 aa13.11□□□□□ -0.31
SLC28A2-201ENST00000347644 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
SLC28A2-201ENST00000347644 CARMIL2Q6F5E8 1435 aa13.1□□□□□ -0.31
SLC28A2-201ENST00000347644 JPH4Q96JJ6 628 aa13.09□□□□□ -0.31
SLC28A2-201ENST00000347644 PLEKHD1A6NEE1 506 aa13.08□□□□□ -0.32
SLC28A2-201ENST00000347644 AQRO60306 1485 aaKnown RBP eCLIP13.06□□□□□ -0.32
SLC28A2-201ENST00000347644 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
SLC28A2-201ENST00000347644 CARMIL1Q5VZK9 1371 aa13.03□□□□□ -0.32
SLC28A2-201ENST00000347644 FAM69CQ0P6D2 419 aa13□□□□□ -0.33
SLC28A2-201ENST00000347644 GAPVD1Q14C86 1478 aa12.99□□□□□ -0.33
SLC28A2-201ENST00000347644 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
SLC28A2-201ENST00000347644 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
SLC28A2-201ENST00000347644 RAD54L2Q9Y4B4 1467 aa12.97□□□□□ -0.33
SLC28A2-201ENST00000347644 BCANQ96GW7 911 aa12.95□□□□□ -0.34
SLC28A2-201ENST00000347644 TOPBP1Q92547 1522 aa12.95□□□□□ -0.34
SLC28A2-201ENST00000347644 PTPRGP23470 1445 aa12.92□□□□□ -0.34
SLC28A2-201ENST00000347644 ITGAEP38570 1179 aa12.91□□□□□ -0.34
SLC28A2-201ENST00000347644 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
SLC28A2-201ENST00000347644 WDR97A6NE52 1622 aa12.91□□□□□ -0.34
SLC28A2-201ENST00000347644 WDR62O43379 1518 aa12.91□□□□□ -0.34
SLC28A2-201ENST00000347644 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.35
SLC28A2-201ENST00000347644 BIVM-ERCC5R4GMW8 1640 aa12.86□□□□□ -0.35
SLC28A2-201ENST00000347644 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
SLC28A2-201ENST00000347644 POLA1P09884 1462 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms