RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
RAD50-201ENST00000378823 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
RAD50-201ENST00000378823 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
RAD50-201ENST00000378823 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
RAD50-201ENST00000378823 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
RAD50-201ENST00000378823 APLP2Q06481 763 aa17.5■□□□□ 0.39
RAD50-201ENST00000378823 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
RAD50-201ENST00000378823 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.36
RAD50-201ENST00000378823 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
RAD50-201ENST00000378823 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
RAD50-201ENST00000378823 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
RAD50-201ENST00000378823 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
RAD50-201ENST00000378823 TTBK1Q5TCY1 1321 aaPredicted RBP17.05■□□□□ 0.32
RAD50-201ENST00000378823 ZEB1P37275 1124 aaPredicted RBP17.04■□□□□ 0.32
RAD50-201ENST00000378823 MYT1Q01538 1121 aa17.01■□□□□ 0.31
RAD50-201ENST00000378823 NEFLP07196 543 aa16.9■□□□□ 0.3
RAD50-201ENST00000378823 RANGAP1P46060 587 aaPredicted RBP16.77■□□□□ 0.28
RAD50-201ENST00000378823 ATP1B4Q9UN42 357 aaPredicted RBP16.75■□□□□ 0.27
RAD50-201ENST00000378823 TRIM41Q8WV44 630 aa16.68■□□□□ 0.26
RAD50-201ENST00000378823 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
RAD50-201ENST00000378823 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
RAD50-201ENST00000378823 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
RAD50-201ENST00000378823 TRIM26Q12899 539 aaPredicted RBP16.33■□□□□ 0.2
RAD50-201ENST00000378823 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.2
RAD50-201ENST00000378823 POLR3GLQ9BT43 218 aa16.22■□□□□ 0.19
RAD50-201ENST00000378823 HRCP23327 699 aa16.19■□□□□ 0.18
RAD50-201ENST00000378823 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
RAD50-201ENST00000378823 RTL5Q5HYW3 569 aaPredicted RBP16.15■□□□□ 0.18
RAD50-201ENST00000378823 MYT1LQ9UL68 1186 aa16.14■□□□□ 0.17
RAD50-201ENST00000378823 ITGAEP38570 1179 aa16.13■□□□□ 0.17
RAD50-201ENST00000378823 CLSPNQ9HAW4 1339 aa16.06■□□□□ 0.16
RAD50-201ENST00000378823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
RAD50-201ENST00000378823 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
RAD50-201ENST00000378823 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
RAD50-201ENST00000378823 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
RAD50-201ENST00000378823 DIEXFQ68CQ4 756 aaKnown RBP15.94■□□□□ 0.14
RAD50-201ENST00000378823 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
RAD50-201ENST00000378823 LOC105371045A0A1W2PR82 267 aa15.84■□□□□ 0.13
RAD50-201ENST00000378823 CDK11AQ9UQ88 783 aaPredicted RBP15.74■□□□□ 0.11
RAD50-201ENST00000378823 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
RAD50-201ENST00000378823 FAM50AQ14320 339 aaKnown RBP15.7■□□□□ 0.1
RAD50-201ENST00000378823 ANP32CO43423 234 aa15.66■□□□□ 0.1
RAD50-201ENST00000378823 GTF3C3Q9Y5Q9 886 aa15.64■□□□□ 0.09
RAD50-201ENST00000378823 TRIM52Q96A61 297 aa15.63■□□□□ 0.09
RAD50-201ENST00000378823 BCANQ96GW7 911 aa15.62■□□□□ 0.09
RAD50-201ENST00000378823 NEUROD1Q13562 356 aa15.62■□□□□ 0.09
RAD50-201ENST00000378823 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
RAD50-201ENST00000378823 ANP32AP39687 249 aaKnown RBP15.54■□□□□ 0.08
RAD50-201ENST00000378823 SLC24A1O60721 1099 aa15.52■□□□□ 0.07
RAD50-201ENST00000378823 ZNF326Q5BKZ1 582 aaKnown RBP15.49■□□□□ 0.07
RAD50-201ENST00000378823 NEFMP07197 916 aa15.49■□□□□ 0.07
RAD50-201ENST00000378823 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
RAD50-201ENST00000378823 ANP32BQ92688 251 aaKnown RBP15.46■□□□□ 0.07
RAD50-201ENST00000378823 EIF5BO60841 1220 aaKnown RBP15.37■□□□□ 0.05
RAD50-201ENST00000378823 HSP90AA1P07900 732 aaKnown RBP15.37■□□□□ 0.05
RAD50-201ENST00000378823 GLIPR1L2Q4G1C9 344 aa15.34■□□□□ 0.05
RAD50-201ENST00000378823 NPM2Q86SE8 214 aaKnown RBP15.34■□□□□ 0.05
RAD50-201ENST00000378823 ACIN1Q9UKV3 1341 aaKnown RBP15.31■□□□□ 0.04
RAD50-201ENST00000378823 UPF2Q9HAU5 1272 aaKnown RBP15.31■□□□□ 0.04
RAD50-201ENST00000378823 FKBP8Q14318 412 aa15.18■□□□□ 0.02
RAD50-201ENST00000378823 FBLN2P98095 1184 aa15.18■□□□□ 0.02
RAD50-201ENST00000378823 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
RAD50-201ENST00000378823 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
RAD50-201ENST00000378823 NBR1Q14596 966 aa15.1■□□□□ 0.01
RAD50-201ENST00000378823 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.07■□□□□ 0
RAD50-201ENST00000378823 CCDC136Q96JN2 1154 aa15.06■□□□□ 0
RAD50-201ENST00000378823 ZNF777Q9ULD5 760 aaPredicted RBP15.05■□□□□ -0
RAD50-201ENST00000378823 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
RAD50-201ENST00000378823 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
RAD50-201ENST00000378823 P3H3Q8IVL6 736 aa15.04■□□□□ -0
RAD50-201ENST00000378823 ABCC9O60706 1549 aa15.02■□□□□ -0
RAD50-201ENST00000378823 TMC1Q8TDI8 760 aa15.02■□□□□ -0
RAD50-201ENST00000378823 ARXQ96QS3 562 aa15.02■□□□□ -0
RAD50-201ENST00000378823 ESF1Q9H501 851 aaKnown RBP15.02□□□□□ -0.01
RAD50-201ENST00000378823 ARID3CA6NKF2 412 aa15.01□□□□□ -0.01
RAD50-201ENST00000378823 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
RAD50-201ENST00000378823 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
RAD50-201ENST00000378823 DDX10Q13206 875 aaKnown RBP14.98□□□□□ -0.01
RAD50-201ENST00000378823 CDK11BP21127 795 aaKnown RBP14.96□□□□□ -0.01
RAD50-201ENST00000378823 WDR43Q15061 677 aaKnown RBP eCLIP14.95□□□□□ -0.02
RAD50-201ENST00000378823 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
RAD50-201ENST00000378823 MYH16Q9H6N6 1097 aa14.93□□□□□ -0.02
RAD50-201ENST00000378823 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
RAD50-201ENST00000378823 TRIM44Q96DX7 344 aaPredicted RBP14.91□□□□□ -0.02
RAD50-201ENST00000378823 DCAF1Q9Y4B6 1507 aa14.9□□□□□ -0.02
RAD50-201ENST00000378823 BECN1Q14457 450 aa14.89□□□□□ -0.03
RAD50-201ENST00000378823 ANP32EQ9BTT0 268 aa14.88□□□□□ -0.03
RAD50-201ENST00000378823 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
RAD50-201ENST00000378823 TNNT2P45379 298 aaPredicted RBP14.85□□□□□ -0.03
RAD50-201ENST00000378823 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
RAD50-201ENST00000378823 MRS2Q9HD23 443 aa14.84□□□□□ -0.03
RAD50-201ENST00000378823 NCLP19338 710 aaKnown RBP14.83□□□□□ -0.03
RAD50-201ENST00000378823 GOLGA6L22H0YM25 854 aa14.83□□□□□ -0.04
RAD50-201ENST00000378823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.045e-9■■■■□ 19.3
RAD50-201ENST00000378823 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
RAD50-201ENST00000378823 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
RAD50-201ENST00000378823 ZRSR1Q15695 479 aaKnown RBP14.75□□□□□ -0.05
RAD50-201ENST00000378823 KDM2AQ9Y2K7 1162 aa14.75□□□□□ -0.05
RAD50-201ENST00000378823 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
RAD50-201ENST00000378823 DNTTIP2Q5QJE6 756 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms