RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
CCDC144A-206ENST00000399273 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
CCDC144A-206ENST00000399273 SUPT5HO00267 1087 aaKnown RBP18.55■□□□□ 0.56
CCDC144A-206ENST00000399273 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
CCDC144A-206ENST00000399273 APLP2Q06481 763 aa18.34■□□□□ 0.53
CCDC144A-206ENST00000399273 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
CCDC144A-206ENST00000399273 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
CCDC144A-206ENST00000399273 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
CCDC144A-206ENST00000399273 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
CCDC144A-206ENST00000399273 ERICH6Q7L0X2 663 aa17.73■□□□□ 0.43
CCDC144A-206ENST00000399273 ATP1B4Q9UN42 357 aaPredicted RBP17.67■□□□□ 0.42
CCDC144A-206ENST00000399273 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.41
CCDC144A-206ENST00000399273 RANGAP1P46060 587 aaPredicted RBP17.56■□□□□ 0.4
CCDC144A-206ENST00000399273 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
CCDC144A-206ENST00000399273 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
CCDC144A-206ENST00000399273 NEFLP07196 543 aa17.33■□□□□ 0.37
CCDC144A-206ENST00000399273 UBTFP17480 764 aaKnown RBP17.3■□□□□ 0.36
CCDC144A-206ENST00000399273 MYT1LQ9UL68 1186 aa17.3■□□□□ 0.36
CCDC144A-206ENST00000399273 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
CCDC144A-206ENST00000399273 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
CCDC144A-206ENST00000399273 DAXXQ9UER7 740 aaPredicted RBP17.1■□□□□ 0.33
CCDC144A-206ENST00000399273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.05■□□□□ 0.32
CCDC144A-206ENST00000399273 HNRNPUL2Q1KMD3 747 aaKnown RBP17.05■□□□□ 0.32
CCDC144A-206ENST00000399273 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
CCDC144A-206ENST00000399273 POLR3GLQ9BT43 218 aa16.93■□□□□ 0.3
CCDC144A-206ENST00000399273 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
CCDC144A-206ENST00000399273 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
CCDC144A-206ENST00000399273 ITGAEP38570 1179 aa16.76■□□□□ 0.27
CCDC144A-206ENST00000399273 MYT1Q01538 1121 aa16.75■□□□□ 0.27
CCDC144A-206ENST00000399273 PPARGC1BQ86YN6 1023 aaKnown RBP16.64■□□□□ 0.25
CCDC144A-206ENST00000399273 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
CCDC144A-206ENST00000399273 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
CCDC144A-206ENST00000399273 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
CCDC144A-206ENST00000399273 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
CCDC144A-206ENST00000399273 ZBTB47Q9UFB7 747 aaPredicted RBP16.49■□□□□ 0.23
CCDC144A-206ENST00000399273 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
CCDC144A-206ENST00000399273 RTL5Q5HYW3 569 aaPredicted RBP16.42■□□□□ 0.22
CCDC144A-206ENST00000399273 BCANQ96GW7 911 aa16.38■□□□□ 0.21
CCDC144A-206ENST00000399273 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
CCDC144A-206ENST00000399273 TRIM52Q96A61 297 aa16.35■□□□□ 0.21
CCDC144A-206ENST00000399273 NEFMP07197 916 aa16.33■□□□□ 0.2
CCDC144A-206ENST00000399273 FBLN2P98095 1184 aa16.25■□□□□ 0.19
CCDC144A-206ENST00000399273 CANXP27824 592 aaKnown RBP16.22■□□□□ 0.19
CCDC144A-206ENST00000399273 ESF1Q9H501 851 aaKnown RBP16.19■□□□□ 0.18
CCDC144A-206ENST00000399273 HRCP23327 699 aa16.18■□□□□ 0.18
CCDC144A-206ENST00000399273 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
CCDC144A-206ENST00000399273 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
CCDC144A-206ENST00000399273 BCL11AQ9H165 835 aa16.13■□□□□ 0.17
CCDC144A-206ENST00000399273 ABCC9O60706 1549 aa16.12■□□□□ 0.17
CCDC144A-206ENST00000399273 ANP32CO43423 234 aa16.08■□□□□ 0.16
CCDC144A-206ENST00000399273 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC144A-206ENST00000399273 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-206ENST00000399273 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
CCDC144A-206ENST00000399273 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
CCDC144A-206ENST00000399273 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
CCDC144A-206ENST00000399273 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
CCDC144A-206ENST00000399273 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
CCDC144A-206ENST00000399273 ANP32BQ92688 251 aaKnown RBP15.89■□□□□ 0.13
CCDC144A-206ENST00000399273 ZNF777Q9ULD5 760 aaPredicted RBP15.87■□□□□ 0.13
CCDC144A-206ENST00000399273 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
CCDC144A-206ENST00000399273 ARID3CA6NKF2 412 aa15.82■□□□□ 0.12
CCDC144A-206ENST00000399273 CHGAP10645 457 aaKnown RBP15.81■□□□□ 0.12
CCDC144A-206ENST00000399273 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
CCDC144A-206ENST00000399273 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
CCDC144A-206ENST00000399273 UPF2Q9HAU5 1272 aaKnown RBP15.78■□□□□ 0.12
CCDC144A-206ENST00000399273 CDK11BP21127 795 aaKnown RBP15.75■□□□□ 0.11
CCDC144A-206ENST00000399273 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
CCDC144A-206ENST00000399273 A0A0G2JS52 829 aa15.72■□□□□ 0.11
CCDC144A-206ENST00000399273 NPM2Q86SE8 214 aaKnown RBP15.72■□□□□ 0.11
CCDC144A-206ENST00000399273 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
CCDC144A-206ENST00000399273 TONSLQ96HA7 1378 aa15.63■□□□□ 0.09
CCDC144A-206ENST00000399273 MYH16Q9H6N6 1097 aa15.59■□□□□ 0.09
CCDC144A-206ENST00000399273 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.58■□□□□ 0.08
CCDC144A-206ENST00000399273 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
CCDC144A-206ENST00000399273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
CCDC144A-206ENST00000399273 WDR43Q15061 677 aaKnown RBP eCLIP15.54■□□□□ 0.08
CCDC144A-206ENST00000399273 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
CCDC144A-206ENST00000399273 GTF3C3Q9Y5Q9 886 aa15.51■□□□□ 0.07
CCDC144A-206ENST00000399273 ZBTB7CA1YPR0 619 aa15.5■□□□□ 0.07
CCDC144A-206ENST00000399273 PPP1R15AO75807 674 aaPredicted RBP15.49■□□□□ 0.07
CCDC144A-206ENST00000399273 TMC1Q8TDI8 760 aa15.47■□□□□ 0.07
CCDC144A-206ENST00000399273 TSPY4P0CV99 314 aa15.46■□□□□ 0.07
CCDC144A-206ENST00000399273 TSPY10P0CW01 314 aa15.46■□□□□ 0.07
CCDC144A-206ENST00000399273 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
CCDC144A-206ENST00000399273 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
CCDC144A-206ENST00000399273 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
CCDC144A-206ENST00000399273 ARID4BQ4LE39 1312 aaPredicted RBP15.42■□□□□ 0.06
CCDC144A-206ENST00000399273 FAM9BQ8IZU0 186 aa15.41■□□□□ 0.06
CCDC144A-206ENST00000399273 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
CCDC144A-206ENST00000399273 CCDC180Q9P1Z9 1646 aa15.4■□□□□ 0.06
CCDC144A-206ENST00000399273 HNRNPUQ00839 825 aaKnown RBP eCLIP15.4■□□□□ 0.06
CCDC144A-206ENST00000399273 NPHP1O15259 732 aa15.39■□□□□ 0.05
CCDC144A-206ENST00000399273 GLIPR1L2Q4G1C9 344 aa15.39■□□□□ 0.05
CCDC144A-206ENST00000399273 ARXQ96QS3 562 aa15.37■□□□□ 0.05
CCDC144A-206ENST00000399273 EIF5BO60841 1220 aaKnown RBP15.36■□□□□ 0.05
CCDC144A-206ENST00000399273 KDM2AQ9Y2K7 1162 aa15.36■□□□□ 0.05
CCDC144A-206ENST00000399273 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
CCDC144A-206ENST00000399273 NCLP19338 710 aaKnown RBP15.35■□□□□ 0.05
CCDC144A-206ENST00000399273 ZRSR1Q15695 479 aaKnown RBP15.34■□□□□ 0.05
CCDC144A-206ENST00000399273 CCDC136Q96JN2 1154 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms