RNA–Protein interactions for RNA: ENST00000626019.2

NTRK3-220, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 5 BASIC

Gene NTRK3, Length 2,741 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-220ENST00000626019 NISCHQ9Y2I1 1504 aa21.26■□□□□ 0.99
NTRK3-220ENST00000626019 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.55
NTRK3-220ENST00000626019 ZCCHC6Q5VYS8 1495 aaKnown RBP17.82■□□□□ 0.44
NTRK3-220ENST00000626019 ABCC9O60706 1549 aa17.74■□□□□ 0.43
NTRK3-220ENST00000626019 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
NTRK3-220ENST00000626019 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
NTRK3-220ENST00000626019 SHROOM4Q9ULL8 1493 aa17.36■□□□□ 0.37
NTRK3-220ENST00000626019 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.37
NTRK3-220ENST00000626019 NACADO15069 1562 aa17.29■□□□□ 0.36
NTRK3-220ENST00000626019 RB1CC1Q8TDY2 1594 aa17.18■□□□□ 0.34
NTRK3-220ENST00000626019 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
NTRK3-220ENST00000626019 UNC13AQ9UPW8 1703 aa16.89■□□□□ 0.29
NTRK3-220ENST00000626019 PABPN1Q86U42 306 aaKnown RBP eCLIP16.76■□□□□ 0.27
NTRK3-220ENST00000626019 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
NTRK3-220ENST00000626019 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
NTRK3-220ENST00000626019 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
NTRK3-220ENST00000626019 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
NTRK3-220ENST00000626019 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
NTRK3-220ENST00000626019 BAZ1AQ9NRL2 1556 aaPredicted RBP16.39■□□□□ 0.21
NTRK3-220ENST00000626019 SMARCA4P51532 1647 aa16.36■□□□□ 0.21
NTRK3-220ENST00000626019 WIZO95785 1651 aa16.32■□□□□ 0.2
NTRK3-220ENST00000626019 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
NTRK3-220ENST00000626019 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
NTRK3-220ENST00000626019 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
NTRK3-220ENST00000626019 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
NTRK3-220ENST00000626019 SMARCA2P51531 1590 aa16.06■□□□□ 0.16
NTRK3-220ENST00000626019 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
NTRK3-220ENST00000626019 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
NTRK3-220ENST00000626019 NCAPD3P42695 1498 aa16■□□□□ 0.15
NTRK3-220ENST00000626019 CCDC88BA6NC98 1476 aa15.98■□□□□ 0.15
NTRK3-220ENST00000626019 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
NTRK3-220ENST00000626019 HRCP23327 699 aa15.9■□□□□ 0.14
NTRK3-220ENST00000626019 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
NTRK3-220ENST00000626019 CHIC1Q5VXU3 224 aa15.83■□□□□ 0.13
NTRK3-220ENST00000626019 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
NTRK3-220ENST00000626019 PPARGC1BQ86YN6 1023 aaKnown RBP15.66■□□□□ 0.1
NTRK3-220ENST00000626019 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
NTRK3-220ENST00000626019 CFTRP13569 1480 aa15.62■□□□□ 0.09
NTRK3-220ENST00000626019 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
NTRK3-220ENST00000626019 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
NTRK3-220ENST00000626019 NESP48681 1621 aa15.56■□□□□ 0.08
NTRK3-220ENST00000626019 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
NTRK3-220ENST00000626019 PRDM2Q13029 1718 aa15.47■□□□□ 0.07
NTRK3-220ENST00000626019 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
NTRK3-220ENST00000626019 LAMC3Q9Y6N6 1575 aa15.44■□□□□ 0.06
NTRK3-220ENST00000626019 PCGF6Q9BYE7 350 aa15.44■□□□□ 0.06
NTRK3-220ENST00000626019 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
NTRK3-220ENST00000626019 CUX1P39880 1505 aa15.39■□□□□ 0.05
NTRK3-220ENST00000626019 FAM9AQ8IZU1 332 aaPredicted RBP15.37■□□□□ 0.05
NTRK3-220ENST00000626019 TOP2BQ02880 1626 aa15.36■□□□□ 0.05
NTRK3-220ENST00000626019 PDS5BQ9NTI5 1447 aa15.33■□□□□ 0.05
NTRK3-220ENST00000626019 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.05
NTRK3-220ENST00000626019 KIF21AQ7Z4S6 1674 aa15.32■□□□□ 0.04
NTRK3-220ENST00000626019 SCAF1Q9H7N4 1312 aaKnown RBP15.32■□□□□ 0.04
NTRK3-220ENST00000626019 SOGA1O94964 1423 aa15.31■□□□□ 0.04
NTRK3-220ENST00000626019 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
NTRK3-220ENST00000626019 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
NTRK3-220ENST00000626019 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
NTRK3-220ENST00000626019 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
NTRK3-220ENST00000626019 MYT1Q01538 1121 aa15.27■□□□□ 0.03
NTRK3-220ENST00000626019 URB2Q14146 1524 aaKnown RBP15.26■□□□□ 0.03
NTRK3-220ENST00000626019 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
NTRK3-220ENST00000626019 DNMBPQ6XZF7 1577 aa15.23■□□□□ 0.03
NTRK3-220ENST00000626019 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
NTRK3-220ENST00000626019 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
NTRK3-220ENST00000626019 ERCC6Q03468 1493 aa15.17■□□□□ 0.02
NTRK3-220ENST00000626019 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
NTRK3-220ENST00000626019 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
NTRK3-220ENST00000626019 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
NTRK3-220ENST00000626019 EEA1Q15075 1411 aa15.12■□□□□ 0.01
NTRK3-220ENST00000626019 CUX2O14529 1486 aa15.1■□□□□ 0.01
NTRK3-220ENST00000626019 WDR62O43379 1518 aa15.09■□□□□ 0.01
NTRK3-220ENST00000626019 THOC2Q8NI27 1593 aaKnown RBP15.09■□□□□ 0.01
NTRK3-220ENST00000626019 KIF27Q86VH2 1401 aa15.08■□□□□ 0
NTRK3-220ENST00000626019 ABCA10Q8WWZ4 1543 aa15.06■□□□□ 0
NTRK3-220ENST00000626019 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
NTRK3-220ENST00000626019 WDR97A6NE52 1622 aa15.02■□□□□ -0
NTRK3-220ENST00000626019 TDRD9Q8NDG6 1382 aaKnown RBP15.02■□□□□ -0
NTRK3-220ENST00000626019 IGF1RP08069 1367 aa15.02□□□□□ -0.01
NTRK3-220ENST00000626019 RAPGEF2Q9Y4G8 1499 aa14.98□□□□□ -0.01
NTRK3-220ENST00000626019 KIF21BO75037 1637 aa14.97□□□□□ -0.01
NTRK3-220ENST00000626019 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
NTRK3-220ENST00000626019 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
NTRK3-220ENST00000626019 ZNF608Q9ULD9 1512 aaPredicted RBP14.95□□□□□ -0.02
NTRK3-220ENST00000626019 TRIM26Q12899 539 aaPredicted RBP14.95□□□□□ -0.02
NTRK3-220ENST00000626019 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
NTRK3-220ENST00000626019 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
NTRK3-220ENST00000626019 UBTFP17480 764 aaKnown RBP14.94□□□□□ -0.02
NTRK3-220ENST00000626019 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
NTRK3-220ENST00000626019 GAPVD1Q14C86 1478 aa14.94□□□□□ -0.02
NTRK3-220ENST00000626019 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
NTRK3-220ENST00000626019 ZEB1P37275 1124 aaPredicted RBP14.91□□□□□ -0.02
NTRK3-220ENST00000626019 TNIKQ9UKE5 1360 aa14.9□□□□□ -0.02
NTRK3-220ENST00000626019 ERICH3Q5RHP9 1530 aa14.88□□□□□ -0.03
NTRK3-220ENST00000626019 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
NTRK3-220ENST00000626019 EIF4G3O43432 1585 aaKnown RBP14.84□□□□□ -0.03
NTRK3-220ENST00000626019 CEP162Q5TB80 1403 aa14.83□□□□□ -0.04
NTRK3-220ENST00000626019 RANGAP1P46060 587 aaPredicted RBP14.82□□□□□ -0.04
NTRK3-220ENST00000626019 CUL7Q14999 1698 aa14.82□□□□□ -0.04
NTRK3-220ENST00000626019 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms