RNA–Protein interactions for RNA: ENST00000417279.3

IGKV3D-15-201, Transcript of immunoglobulin kappa variable 3D-15 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV3D-15, Length 396 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-15-201ENST00000417279 NISCHQ9Y2I1 1504 aa27.74■■■□□ 2.03
IGKV3D-15-201ENST00000417279 CCDC180Q9P1Z9 1646 aa24.8■■□□□ 1.56
IGKV3D-15-201ENST00000417279 ABCC9O60706 1549 aa24.73■■□□□ 1.55
IGKV3D-15-201ENST00000417279 RB1CC1Q8TDY2 1594 aa23.58■■□□□ 1.37
IGKV3D-15-201ENST00000417279 NACADO15069 1562 aa23.48■■□□□ 1.35
IGKV3D-15-201ENST00000417279 DCAF8L2P0C7V8 631 aa23.44■■□□□ 1.34
IGKV3D-15-201ENST00000417279 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
IGKV3D-15-201ENST00000417279 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
IGKV3D-15-201ENST00000417279 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
IGKV3D-15-201ENST00000417279 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
IGKV3D-15-201ENST00000417279 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
IGKV3D-15-201ENST00000417279 DCAF1Q9Y4B6 1507 aa22.92■■□□□ 1.26
IGKV3D-15-201ENST00000417279 BICRAQ9NZM4 1560 aa22.9■■□□□ 1.26
IGKV3D-15-201ENST00000417279 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
IGKV3D-15-201ENST00000417279 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
IGKV3D-15-201ENST00000417279 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
IGKV3D-15-201ENST00000417279 EIF4G1Q04637 1599 aaKnown RBP22.32■■□□□ 1.16
IGKV3D-15-201ENST00000417279 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
IGKV3D-15-201ENST00000417279 NCAPD3P42695 1498 aa21.7■■□□□ 1.06
IGKV3D-15-201ENST00000417279 ATAD2BQ9ULI0 1458 aa21.62■■□□□ 1.05
IGKV3D-15-201ENST00000417279 SMARCA4P51532 1647 aa21.58■■□□□ 1.05
IGKV3D-15-201ENST00000417279 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
IGKV3D-15-201ENST00000417279 BAZ1AQ9NRL2 1556 aaPredicted RBP21.5■■□□□ 1.03
IGKV3D-15-201ENST00000417279 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
IGKV3D-15-201ENST00000417279 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
IGKV3D-15-201ENST00000417279 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
IGKV3D-15-201ENST00000417279 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
IGKV3D-15-201ENST00000417279 ERCC6Q03468 1493 aa21.33■■□□□ 1.01
IGKV3D-15-201ENST00000417279 CUX2O14529 1486 aa21.29■■□□□ 1
IGKV3D-15-201ENST00000417279 NESP48681 1621 aa21.28■■□□□ 1
IGKV3D-15-201ENST00000417279 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
IGKV3D-15-201ENST00000417279 LAMC3Q9Y6N6 1575 aa21.14■□□□□ 0.98
IGKV3D-15-201ENST00000417279 WIZO95785 1651 aa21.11■□□□□ 0.97
IGKV3D-15-201ENST00000417279 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
IGKV3D-15-201ENST00000417279 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
IGKV3D-15-201ENST00000417279 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
IGKV3D-15-201ENST00000417279 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
IGKV3D-15-201ENST00000417279 KIF21AQ7Z4S6 1674 aa20.98■□□□□ 0.95
IGKV3D-15-201ENST00000417279 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
IGKV3D-15-201ENST00000417279 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
IGKV3D-15-201ENST00000417279 CFTRP13569 1480 aa20.81■□□□□ 0.92
IGKV3D-15-201ENST00000417279 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
IGKV3D-15-201ENST00000417279 WDR62O43379 1518 aa20.76■□□□□ 0.91
IGKV3D-15-201ENST00000417279 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
IGKV3D-15-201ENST00000417279 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
IGKV3D-15-201ENST00000417279 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
IGKV3D-15-201ENST00000417279 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
IGKV3D-15-201ENST00000417279 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
IGKV3D-15-201ENST00000417279 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
IGKV3D-15-201ENST00000417279 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
IGKV3D-15-201ENST00000417279 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
IGKV3D-15-201ENST00000417279 ZNF608Q9ULD9 1512 aaPredicted RBP20.31■□□□□ 0.84
IGKV3D-15-201ENST00000417279 TRIM41Q8WV44 630 aa20.3■□□□□ 0.84
IGKV3D-15-201ENST00000417279 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
IGKV3D-15-201ENST00000417279 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
IGKV3D-15-201ENST00000417279 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
IGKV3D-15-201ENST00000417279 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.82
IGKV3D-15-201ENST00000417279 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
IGKV3D-15-201ENST00000417279 EIF4G3O43432 1585 aaKnown RBP20.15■□□□□ 0.82
IGKV3D-15-201ENST00000417279 SOGA1O94964 1423 aa20.14■□□□□ 0.81
IGKV3D-15-201ENST00000417279 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
IGKV3D-15-201ENST00000417279 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
IGKV3D-15-201ENST00000417279 CUX1P39880 1505 aa20.06■□□□□ 0.8
IGKV3D-15-201ENST00000417279 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
IGKV3D-15-201ENST00000417279 FBLN2P98095 1184 aa20.04■□□□□ 0.8
IGKV3D-15-201ENST00000417279 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
IGKV3D-15-201ENST00000417279 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
IGKV3D-15-201ENST00000417279 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
IGKV3D-15-201ENST00000417279 CHD1O14646 1710 aa20.01■□□□□ 0.79
IGKV3D-15-201ENST00000417279 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
IGKV3D-15-201ENST00000417279 ARHGEF11O15085 1522 aa19.98■□□□□ 0.79
IGKV3D-15-201ENST00000417279 CHMP7Q8WUX9 453 aaPredicted RBP19.93■□□□□ 0.78
IGKV3D-15-201ENST00000417279 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
IGKV3D-15-201ENST00000417279 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
IGKV3D-15-201ENST00000417279 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
IGKV3D-15-201ENST00000417279 MAGI1Q96QZ7 1491 aaPredicted RBP19.89■□□□□ 0.77
IGKV3D-15-201ENST00000417279 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
IGKV3D-15-201ENST00000417279 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
IGKV3D-15-201ENST00000417279 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
IGKV3D-15-201ENST00000417279 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
IGKV3D-15-201ENST00000417279 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
IGKV3D-15-201ENST00000417279 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
IGKV3D-15-201ENST00000417279 PBRM1Q86U86 1689 aa19.79■□□□□ 0.76
IGKV3D-15-201ENST00000417279 CLASP1Q7Z460 1538 aa19.79■□□□□ 0.76
IGKV3D-15-201ENST00000417279 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
IGKV3D-15-201ENST00000417279 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
IGKV3D-15-201ENST00000417279 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
IGKV3D-15-201ENST00000417279 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
IGKV3D-15-201ENST00000417279 GRIN2AQ12879 1464 aa19.64■□□□□ 0.73
IGKV3D-15-201ENST00000417279 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
IGKV3D-15-201ENST00000417279 ERICH3Q5RHP9 1530 aa19.61■□□□□ 0.73
IGKV3D-15-201ENST00000417279 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
IGKV3D-15-201ENST00000417279 NUP160Q12769 1436 aa19.59■□□□□ 0.73
IGKV3D-15-201ENST00000417279 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
IGKV3D-15-201ENST00000417279 ERCC6L2Q5T890 1561 aa19.49■□□□□ 0.71
IGKV3D-15-201ENST00000417279 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
IGKV3D-15-201ENST00000417279 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
IGKV3D-15-201ENST00000417279 IGF1RP08069 1367 aa19.44■□□□□ 0.7
IGKV3D-15-201ENST00000417279 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
IGKV3D-15-201ENST00000417279 PRG4Q92954 1404 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms