RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-208ENST00000439209 NISCHQ9Y2I1 1504 aa28.11■■■□□ 2.09
LRTOMT-208ENST00000439209 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
LRTOMT-208ENST00000439209 ABCC9O60706 1549 aa25.07■■□□□ 1.6
LRTOMT-208ENST00000439209 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
LRTOMT-208ENST00000439209 NACADO15069 1562 aa23.79■■□□□ 1.4
LRTOMT-208ENST00000439209 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
LRTOMT-208ENST00000439209 UNC13AQ9UPW8 1703 aa23.56■■□□□ 1.36
LRTOMT-208ENST00000439209 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
LRTOMT-208ENST00000439209 DNAJC5BQ9UF47 199 aa23.36■■□□□ 1.33
LRTOMT-208ENST00000439209 ZCCHC6Q5VYS8 1495 aaKnown RBP23.35■■□□□ 1.33
LRTOMT-208ENST00000439209 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
LRTOMT-208ENST00000439209 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
LRTOMT-208ENST00000439209 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
LRTOMT-208ENST00000439209 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
LRTOMT-208ENST00000439209 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
LRTOMT-208ENST00000439209 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
LRTOMT-208ENST00000439209 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
LRTOMT-208ENST00000439209 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
LRTOMT-208ENST00000439209 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
LRTOMT-208ENST00000439209 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
LRTOMT-208ENST00000439209 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
LRTOMT-208ENST00000439209 SMARCA2P51531 1590 aa21.86■■□□□ 1.09
LRTOMT-208ENST00000439209 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
LRTOMT-208ENST00000439209 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
LRTOMT-208ENST00000439209 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
LRTOMT-208ENST00000439209 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
LRTOMT-208ENST00000439209 MROH2BQ7Z745 1585 aa21.67■■□□□ 1.06
LRTOMT-208ENST00000439209 ERCC6Q03468 1493 aa21.63■■□□□ 1.05
LRTOMT-208ENST00000439209 NESP48681 1621 aa21.59■■□□□ 1.05
LRTOMT-208ENST00000439209 CUX2O14529 1486 aa21.57■■□□□ 1.04
LRTOMT-208ENST00000439209 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
LRTOMT-208ENST00000439209 WIZO95785 1651 aa21.47■■□□□ 1.03
LRTOMT-208ENST00000439209 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
LRTOMT-208ENST00000439209 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
LRTOMT-208ENST00000439209 DNAJC5Q9H3Z4 198 aa21.34■■□□□ 1.01
LRTOMT-208ENST00000439209 PDS5BQ9NTI5 1447 aa21.27■■□□□ 1
LRTOMT-208ENST00000439209 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
LRTOMT-208ENST00000439209 RSF1Q96T23 1441 aaPredicted RBP21.21■□□□□ 0.99
LRTOMT-208ENST00000439209 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
LRTOMT-208ENST00000439209 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
LRTOMT-208ENST00000439209 WDR62O43379 1518 aa21.1■□□□□ 0.97
LRTOMT-208ENST00000439209 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
LRTOMT-208ENST00000439209 CFTRP13569 1480 aa21.05■□□□□ 0.96
LRTOMT-208ENST00000439209 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
LRTOMT-208ENST00000439209 FANCD2Q9BXW9 1451 aa21.04■□□□□ 0.96
LRTOMT-208ENST00000439209 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
LRTOMT-208ENST00000439209 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
LRTOMT-208ENST00000439209 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
LRTOMT-208ENST00000439209 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
LRTOMT-208ENST00000439209 IFT140Q96RY7 1462 aa20.62■□□□□ 0.89
LRTOMT-208ENST00000439209 ABCC8Q09428 1581 aa20.59■□□□□ 0.89
LRTOMT-208ENST00000439209 ZNF608Q9ULD9 1512 aaPredicted RBP20.59■□□□□ 0.89
LRTOMT-208ENST00000439209 EIF4G3O43432 1585 aaKnown RBP20.56■□□□□ 0.88
LRTOMT-208ENST00000439209 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
LRTOMT-208ENST00000439209 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
LRTOMT-208ENST00000439209 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
LRTOMT-208ENST00000439209 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
LRTOMT-208ENST00000439209 CHD1O14646 1710 aa20.44■□□□□ 0.86
LRTOMT-208ENST00000439209 AQRO60306 1485 aaKnown RBP eCLIP20.39■□□□□ 0.85
LRTOMT-208ENST00000439209 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
LRTOMT-208ENST00000439209 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
LRTOMT-208ENST00000439209 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
LRTOMT-208ENST00000439209 RAD54L2Q9Y4B4 1467 aa20.37■□□□□ 0.85
LRTOMT-208ENST00000439209 CUX1P39880 1505 aa20.37■□□□□ 0.85
LRTOMT-208ENST00000439209 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
LRTOMT-208ENST00000439209 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
LRTOMT-208ENST00000439209 SOGA1O94964 1423 aa20.32■□□□□ 0.84
LRTOMT-208ENST00000439209 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
LRTOMT-208ENST00000439209 ARHGEF11O15085 1522 aa20.29■□□□□ 0.84
LRTOMT-208ENST00000439209 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
LRTOMT-208ENST00000439209 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
LRTOMT-208ENST00000439209 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
LRTOMT-208ENST00000439209 FBLN2P98095 1184 aa20.18■□□□□ 0.82
LRTOMT-208ENST00000439209 GRIN2BQ13224 1484 aa20.16■□□□□ 0.82
LRTOMT-208ENST00000439209 MAGI1Q96QZ7 1491 aaPredicted RBP20.16■□□□□ 0.82
LRTOMT-208ENST00000439209 ABCA5Q8WWZ7 1642 aa20.15■□□□□ 0.82
LRTOMT-208ENST00000439209 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
LRTOMT-208ENST00000439209 CLASP1Q7Z460 1538 aa20.12■□□□□ 0.81
LRTOMT-208ENST00000439209 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
LRTOMT-208ENST00000439209 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
LRTOMT-208ENST00000439209 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
LRTOMT-208ENST00000439209 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
LRTOMT-208ENST00000439209 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
LRTOMT-208ENST00000439209 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
LRTOMT-208ENST00000439209 CHMP7Q8WUX9 453 aaPredicted RBP20.04■□□□□ 0.8
LRTOMT-208ENST00000439209 CYB5RLQ6IPT4 315 aa20.03■□□□□ 0.8
LRTOMT-208ENST00000439209 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.79
LRTOMT-208ENST00000439209 ADAMTS12P58397 1594 aa19.98■□□□□ 0.79
LRTOMT-208ENST00000439209 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
LRTOMT-208ENST00000439209 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
LRTOMT-208ENST00000439209 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
LRTOMT-208ENST00000439209 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
LRTOMT-208ENST00000439209 NUP160Q12769 1436 aa19.84■□□□□ 0.77
LRTOMT-208ENST00000439209 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.76
LRTOMT-208ENST00000439209 SHROOM2Q13796 1616 aa19.81■□□□□ 0.76
LRTOMT-208ENST00000439209 TRHP20396 242 aaPredicted RBP19.77■□□□□ 0.76
LRTOMT-208ENST00000439209 RUSC2Q8N2Y8 1516 aa19.71■□□□□ 0.75
LRTOMT-208ENST00000439209 CUL7Q14999 1698 aa19.67■□□□□ 0.74
LRTOMT-208ENST00000439209 KIF27Q86VH2 1401 aa19.61■□□□□ 0.73
LRTOMT-208ENST00000439209 PRG4Q92954 1404 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms