RNA–Protein interactions for RNA: ENST00000505156.2

LINC00536-201, long intergenic non-protein coding RNA 536, humanhuman

TSL 1 (best) BASIC

Gene LINC00536, Length 2,692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00536-201ENST00000505156 NISCHQ9Y2I1 1504 aa15.61■□□□□ 0.09
LINC00536-201ENST00000505156 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
LINC00536-201ENST00000505156 ZCCHC6Q5VYS8 1495 aaKnown RBP13.24□□□□□ -0.29
LINC00536-201ENST00000505156 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
LINC00536-201ENST00000505156 SUPT5HO00267 1087 aaKnown RBP12.96□□□□□ -0.34
LINC00536-201ENST00000505156 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
LINC00536-201ENST00000505156 DCAF8L2P0C7V8 631 aa12.89□□□□□ -0.35
LINC00536-201ENST00000505156 CHIC1Q5VXU3 224 aa12.75□□□□□ -0.37
LINC00536-201ENST00000505156 ABCC9O60706 1549 aa12.68□□□□□ -0.38
LINC00536-201ENST00000505156 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
LINC00536-201ENST00000505156 HRCP23327 699 aa12.55□□□□□ -0.4
LINC00536-201ENST00000505156 NACADO15069 1562 aa12.5□□□□□ -0.41
LINC00536-201ENST00000505156 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
LINC00536-201ENST00000505156 PCGF6Q9BYE7 350 aa12.36□□□□□ -0.43
LINC00536-201ENST00000505156 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
LINC00536-201ENST00000505156 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
LINC00536-201ENST00000505156 LOC105371045A0A1W2PR82 267 aa12.27□□□□□ -0.45
LINC00536-201ENST00000505156 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
LINC00536-201ENST00000505156 UNC13AQ9UPW8 1703 aa12.16□□□□□ -0.46
LINC00536-201ENST00000505156 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
LINC00536-201ENST00000505156 ZEB1P37275 1124 aaPredicted RBP12.12□□□□□ -0.47
LINC00536-201ENST00000505156 PPARGC1BQ86YN6 1023 aaKnown RBP12.08□□□□□ -0.48
LINC00536-201ENST00000505156 MROH2BQ7Z745 1585 aa12.08□□□□□ -0.48
LINC00536-201ENST00000505156 CECR2Q9BXF3 1484 aa12.07□□□□□ -0.48
LINC00536-201ENST00000505156 BICRAQ9NZM4 1560 aa12.04□□□□□ -0.48
LINC00536-201ENST00000505156 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
LINC00536-201ENST00000505156 WIZO95785 1651 aa12□□□□□ -0.49
LINC00536-201ENST00000505156 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
LINC00536-201ENST00000505156 PABPN1Q86U42 306 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00536-201ENST00000505156 FAM9AQ8IZU1 332 aaPredicted RBP11.92□□□□□ -0.5
LINC00536-201ENST00000505156 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
LINC00536-201ENST00000505156 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
LINC00536-201ENST00000505156 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
LINC00536-201ENST00000505156 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
LINC00536-201ENST00000505156 EEA1Q15075 1411 aa11.8□□□□□ -0.52
LINC00536-201ENST00000505156 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
LINC00536-201ENST00000505156 TNIKQ9UKE5 1360 aa11.73□□□□□ -0.53
LINC00536-201ENST00000505156 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
LINC00536-201ENST00000505156 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.53
LINC00536-201ENST00000505156 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
LINC00536-201ENST00000505156 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
LINC00536-201ENST00000505156 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.54
LINC00536-201ENST00000505156 SOGA1O94964 1423 aa11.65□□□□□ -0.54
LINC00536-201ENST00000505156 GOLGA3Q08378 1498 aa11.64□□□□□ -0.55
LINC00536-201ENST00000505156 CCER1Q8TC90 406 aaPredicted RBP11.63□□□□□ -0.55
LINC00536-201ENST00000505156 PELP1Q8IZL8 1130 aaKnown RBP11.63□□□□□ -0.55
LINC00536-201ENST00000505156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.59□□□□□ -0.55
LINC00536-201ENST00000505156 KIF21BO75037 1637 aa11.58□□□□□ -0.56
LINC00536-201ENST00000505156 CEP164Q9UPV0 1460 aa11.57□□□□□ -0.56
LINC00536-201ENST00000505156 ATAD2BQ9ULI0 1458 aa11.56□□□□□ -0.56
LINC00536-201ENST00000505156 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
LINC00536-201ENST00000505156 UBTFP17480 764 aaKnown RBP11.54□□□□□ -0.56
LINC00536-201ENST00000505156 AEBP2Q6ZN18 517 aaPredicted RBP11.54□□□□□ -0.56
LINC00536-201ENST00000505156 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
LINC00536-201ENST00000505156 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
LINC00536-201ENST00000505156 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
LINC00536-201ENST00000505156 NCAPD3P42695 1498 aa11.52□□□□□ -0.56
LINC00536-201ENST00000505156 HMGXB3Q12766 1538 aa11.51□□□□□ -0.57
LINC00536-201ENST00000505156 SYNJ1O43426 1573 aa11.51□□□□□ -0.57
LINC00536-201ENST00000505156 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
LINC00536-201ENST00000505156 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
LINC00536-201ENST00000505156 CLIP1P30622 1438 aa11.46□□□□□ -0.57
LINC00536-201ENST00000505156 VPS8Q8N3P4 1428 aa11.46□□□□□ -0.58
LINC00536-201ENST00000505156 CENPBP07199 599 aaPredicted RBP11.44□□□□□ -0.58
LINC00536-201ENST00000505156 TOP2BQ02880 1626 aa11.44□□□□□ -0.58
LINC00536-201ENST00000505156 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
LINC00536-201ENST00000505156 BIVM-ERCC5R4GMW8 1640 aa11.41□□□□□ -0.58
LINC00536-201ENST00000505156 ERICH3Q5RHP9 1530 aa11.4□□□□□ -0.58
LINC00536-201ENST00000505156 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
LINC00536-201ENST00000505156 TTBK1Q5TCY1 1321 aaPredicted RBP11.37□□□□□ -0.59
LINC00536-201ENST00000505156 APLP2Q06481 763 aa11.37□□□□□ -0.59
LINC00536-201ENST00000505156 NEUROD1Q13562 356 aa11.37□□□□□ -0.59
LINC00536-201ENST00000505156 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
LINC00536-201ENST00000505156 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
LINC00536-201ENST00000505156 DNAJC5BQ9UF47 199 aa11.32□□□□□ -0.6
LINC00536-201ENST00000505156 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
LINC00536-201ENST00000505156 GTF3C3Q9Y5Q9 886 aa11.27□□□□□ -0.6
LINC00536-201ENST00000505156 KIF27Q86VH2 1401 aa11.27□□□□□ -0.61
LINC00536-201ENST00000505156 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
LINC00536-201ENST00000505156 CUX1P39880 1505 aa11.25□□□□□ -0.61
LINC00536-201ENST00000505156 CFTRP13569 1480 aa11.25□□□□□ -0.61
LINC00536-201ENST00000505156 RRBP1Q9P2E9 1410 aaKnown RBP11.23□□□□□ -0.61
LINC00536-201ENST00000505156 CUX2O14529 1486 aa11.22□□□□□ -0.61
LINC00536-201ENST00000505156 PRDM2Q13029 1718 aa11.21□□□□□ -0.62
LINC00536-201ENST00000505156 DHX57Q6P158 1386 aaKnown RBP11.2□□□□□ -0.62
LINC00536-201ENST00000505156 MAP3K1Q13233 1512 aa11.19□□□□□ -0.62
LINC00536-201ENST00000505156 MIER1Q8N108 512 aa11.18□□□□□ -0.62
LINC00536-201ENST00000505156 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
LINC00536-201ENST00000505156 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
LINC00536-201ENST00000505156 ARHGAP35Q9NRY4 1499 aa11.15□□□□□ -0.62
LINC00536-201ENST00000505156 KANK4Q5T7N3 995 aaPredicted RBP11.14□□□□□ -0.63
LINC00536-201ENST00000505156 CCNB3Q8WWL7 1395 aa11.13□□□□□ -0.63
LINC00536-201ENST00000505156 RANGAP1P46060 587 aaPredicted RBP11.12□□□□□ -0.63
LINC00536-201ENST00000505156 MYT1Q01538 1121 aa11.12□□□□□ -0.63
LINC00536-201ENST00000505156 IGF1RP08069 1367 aa11.11□□□□□ -0.63
LINC00536-201ENST00000505156 NESP48681 1621 aa11.09□□□□□ -0.63
LINC00536-201ENST00000505156 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
LINC00536-201ENST00000505156 YTHDC1Q96MU7 727 aaKnown RBP11.08□□□□□ -0.64
LINC00536-201ENST00000505156 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
LINC00536-201ENST00000505156 FHAD1B1AJZ9 1412 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms