RNA–Protein interactions for RNA: ENST00000530000.1

AL138889.1-203, humanhuman

TSL 1 (best) BASIC

Gene AL138889.1, Length 6,593 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL138889.1-203ENST00000530000 DCAF8L2P0C7V8 631 aa19.66■□□□□ 0.74
AL138889.1-203ENST00000530000 SUPT5HO00267 1087 aaKnown RBP18.51■□□□□ 0.55
AL138889.1-203ENST00000530000 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
AL138889.1-203ENST00000530000 EHMT2Q96KQ7 1210 aa18.29■□□□□ 0.52
AL138889.1-203ENST00000530000 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
AL138889.1-203ENST00000530000 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
AL138889.1-203ENST00000530000 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
AL138889.1-203ENST00000530000 APLP2Q06481 763 aa17.44■□□□□ 0.38
AL138889.1-203ENST00000530000 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
AL138889.1-203ENST00000530000 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
AL138889.1-203ENST00000530000 ATP1B4Q9UN42 357 aaPredicted RBP17.18■□□□□ 0.34
AL138889.1-203ENST00000530000 PELP1Q8IZL8 1130 aaKnown RBP17.1■□□□□ 0.33
AL138889.1-203ENST00000530000 TRIM41Q8WV44 630 aa17■□□□□ 0.31
AL138889.1-203ENST00000530000 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.3
AL138889.1-203ENST00000530000 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
AL138889.1-203ENST00000530000 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
AL138889.1-203ENST00000530000 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
AL138889.1-203ENST00000530000 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
AL138889.1-203ENST00000530000 CENPBP07199 599 aaPredicted RBP16.59■□□□□ 0.25
AL138889.1-203ENST00000530000 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
AL138889.1-203ENST00000530000 ITGAEP38570 1179 aa16.54■□□□□ 0.24
AL138889.1-203ENST00000530000 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
AL138889.1-203ENST00000530000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
AL138889.1-203ENST00000530000 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
AL138889.1-203ENST00000530000 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
AL138889.1-203ENST00000530000 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
AL138889.1-203ENST00000530000 LOC105371045A0A1W2PR82 267 aa16.4■□□□□ 0.22
AL138889.1-203ENST00000530000 CNGB1Q14028 1251 aaPredicted RBP16.4■□□□□ 0.22
AL138889.1-203ENST00000530000 NEFLP07196 543 aa16.36■□□□□ 0.21
AL138889.1-203ENST00000530000 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.19
AL138889.1-203ENST00000530000 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
AL138889.1-203ENST00000530000 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
AL138889.1-203ENST00000530000 ABCC9O60706 1549 aa16.11■□□□□ 0.17
AL138889.1-203ENST00000530000 HRCP23327 699 aa16.08■□□□□ 0.16
AL138889.1-203ENST00000530000 FAM50AQ14320 339 aaKnown RBP16.02■□□□□ 0.16
AL138889.1-203ENST00000530000 DAXXQ9UER7 740 aaPredicted RBP15.95■□□□□ 0.14
AL138889.1-203ENST00000530000 MYT1Q01538 1121 aa15.93■□□□□ 0.14
AL138889.1-203ENST00000530000 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
AL138889.1-203ENST00000530000 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
AL138889.1-203ENST00000530000 FBLN2P98095 1184 aa15.89■□□□□ 0.13
AL138889.1-203ENST00000530000 ARID3CA6NKF2 412 aa15.82■□□□□ 0.12
AL138889.1-203ENST00000530000 ZNF326Q5BKZ1 582 aaKnown RBP15.8■□□□□ 0.12
AL138889.1-203ENST00000530000 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
AL138889.1-203ENST00000530000 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
AL138889.1-203ENST00000530000 CLSPNQ9HAW4 1339 aa15.73■□□□□ 0.11
AL138889.1-203ENST00000530000 BCANQ96GW7 911 aa15.68■□□□□ 0.1
AL138889.1-203ENST00000530000 BCL11AQ9H165 835 aa15.66■□□□□ 0.1
AL138889.1-203ENST00000530000 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
AL138889.1-203ENST00000530000 ZNF316A6NFI3 1004 aaPredicted RBP15.63■□□□□ 0.09
AL138889.1-203ENST00000530000 ZNF777Q9ULD5 760 aaPredicted RBP15.57■□□□□ 0.08
AL138889.1-203ENST00000530000 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
AL138889.1-203ENST00000530000 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
AL138889.1-203ENST00000530000 ANP32CO43423 234 aa15.51■□□□□ 0.07
AL138889.1-203ENST00000530000 RTL5Q5HYW3 569 aaPredicted RBP15.45■□□□□ 0.06
AL138889.1-203ENST00000530000 GTF3C3Q9Y5Q9 886 aa15.44■□□□□ 0.06
AL138889.1-203ENST00000530000 CANXP27824 592 aaKnown RBP15.41■□□□□ 0.06
AL138889.1-203ENST00000530000 ZBTB47Q9UFB7 747 aaPredicted RBP15.38■□□□□ 0.05
AL138889.1-203ENST00000530000 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
AL138889.1-203ENST00000530000 CHGAP10645 457 aaKnown RBP15.35■□□□□ 0.05
AL138889.1-203ENST00000530000 CDK11AQ9UQ88 783 aaPredicted RBP15.31■□□□□ 0.04
AL138889.1-203ENST00000530000 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
AL138889.1-203ENST00000530000 NEFMP07197 916 aa15.27■□□□□ 0.03
AL138889.1-203ENST00000530000 STAG3Q9UJ98 1225 aa15.26■□□□□ 0.03
AL138889.1-203ENST00000530000 ESF1Q9H501 851 aaKnown RBP15.26■□□□□ 0.03
AL138889.1-203ENST00000530000 CHIC2Q9UKJ5 165 aa15.25■□□□□ 0.03
AL138889.1-203ENST00000530000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
AL138889.1-203ENST00000530000 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
AL138889.1-203ENST00000530000 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
AL138889.1-203ENST00000530000 FAM9BQ8IZU0 186 aa15.15■□□□□ 0.02
AL138889.1-203ENST00000530000 TONSLQ96HA7 1378 aa15.14■□□□□ 0.01
AL138889.1-203ENST00000530000 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
AL138889.1-203ENST00000530000 DDX10Q13206 875 aaKnown RBP15.13■□□□□ 0.01
AL138889.1-203ENST00000530000 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
AL138889.1-203ENST00000530000 KDM2AQ9Y2K7 1162 aa15.13■□□□□ 0.01
AL138889.1-203ENST00000530000 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
AL138889.1-203ENST00000530000 FKBP8Q14318 412 aa15.09■□□□□ 0.01
AL138889.1-203ENST00000530000 SCAF1Q9H7N4 1312 aaKnown RBP15.08■□□□□ 0
AL138889.1-203ENST00000530000 ACIN1Q9UKV3 1341 aaKnown RBP15.07■□□□□ 0
AL138889.1-203ENST00000530000 HNRNPUQ00839 825 aaKnown RBP eCLIP15.06■□□□□ 0
AL138889.1-203ENST00000530000 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
AL138889.1-203ENST00000530000 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
AL138889.1-203ENST00000530000 ANP32AP39687 249 aaKnown RBP15.03■□□□□ -0
AL138889.1-203ENST00000530000 ZBTB7CA1YPR0 619 aa15.02□□□□□ -0.01
AL138889.1-203ENST00000530000 KCNH8Q96L42 1107 aa15□□□□□ -0.01
AL138889.1-203ENST00000530000 A0A0G2JS52 829 aa14.99□□□□□ -0.01
AL138889.1-203ENST00000530000 RRP7BPQ9NSQ0 103 aa14.98□□□□□ -0.01
AL138889.1-203ENST00000530000 SENP3-EIF4A1A0A087X0R7 540 aa14.97□□□□□ -0.01
AL138889.1-203ENST00000530000 IRX6P78412 446 aaPredicted RBP14.96□□□□□ -0.02
AL138889.1-203ENST00000530000 TMC1Q8TDI8 760 aa14.95□□□□□ -0.02
AL138889.1-203ENST00000530000 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
AL138889.1-203ENST00000530000 HSP90AA1P07900 732 aaKnown RBP14.94□□□□□ -0.02
AL138889.1-203ENST00000530000 TSPY4P0CV99 314 aa14.93□□□□□ -0.02
AL138889.1-203ENST00000530000 TSPY10P0CW01 314 aa14.93□□□□□ -0.02
AL138889.1-203ENST00000530000 WDR43Q15061 677 aaKnown RBP eCLIP14.91□□□□□ -0.02
AL138889.1-203ENST00000530000 C14orf37Q86TY3 774 aa14.91□□□□□ -0.02
AL138889.1-203ENST00000530000 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
AL138889.1-203ENST00000530000 ARXQ96QS3 562 aa14.87□□□□□ -0.03
AL138889.1-203ENST00000530000 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
AL138889.1-203ENST00000530000 MRS2Q9HD23 443 aa14.86□□□□□ -0.03
AL138889.1-203ENST00000530000 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms