RNA–Protein interactions for RNA: ENST00000618412.4

GTF2IP1-205, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,990 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-205ENST00000618412 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
GTF2IP1-205ENST00000618412 CCDC180Q9P1Z9 1646 aa17.85■□□□□ 0.45
GTF2IP1-205ENST00000618412 ABCC9O60706 1549 aa17.73■□□□□ 0.43
GTF2IP1-205ENST00000618412 RB1CC1Q8TDY2 1594 aa16.97■□□□□ 0.31
GTF2IP1-205ENST00000618412 NACADO15069 1562 aa16.85■□□□□ 0.29
GTF2IP1-205ENST00000618412 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.26
GTF2IP1-205ENST00000618412 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
GTF2IP1-205ENST00000618412 UNC13AQ9UPW8 1703 aa16.63■□□□□ 0.25
GTF2IP1-205ENST00000618412 BICRAQ9NZM4 1560 aa16.48■□□□□ 0.23
GTF2IP1-205ENST00000618412 HRCP23327 699 aa16.44■□□□□ 0.22
GTF2IP1-205ENST00000618412 PABPN1Q86U42 306 aaKnown RBP eCLIP16.41■□□□□ 0.22
GTF2IP1-205ENST00000618412 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
GTF2IP1-205ENST00000618412 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
GTF2IP1-205ENST00000618412 SHROOM4Q9ULL8 1493 aa16.35■□□□□ 0.21
GTF2IP1-205ENST00000618412 ZCCHC6Q5VYS8 1495 aaKnown RBP16.34■□□□□ 0.21
GTF2IP1-205ENST00000618412 PPARGC1BQ86YN6 1023 aaKnown RBP16.27■□□□□ 0.2
GTF2IP1-205ENST00000618412 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
GTF2IP1-205ENST00000618412 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
GTF2IP1-205ENST00000618412 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
GTF2IP1-205ENST00000618412 SUPT5HO00267 1087 aaKnown RBP16.07■□□□□ 0.16
GTF2IP1-205ENST00000618412 EIF4G1Q04637 1599 aaKnown RBP16.06■□□□□ 0.16
GTF2IP1-205ENST00000618412 CECR2Q9BXF3 1484 aa16.03■□□□□ 0.16
GTF2IP1-205ENST00000618412 PELP1Q8IZL8 1130 aaKnown RBP15.89■□□□□ 0.13
GTF2IP1-205ENST00000618412 CHIC1Q5VXU3 224 aa15.78■□□□□ 0.12
GTF2IP1-205ENST00000618412 SCAF1Q9H7N4 1312 aaKnown RBP15.71■□□□□ 0.11
GTF2IP1-205ENST00000618412 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
GTF2IP1-205ENST00000618412 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
GTF2IP1-205ENST00000618412 DNAJC5Q9H3Z4 198 aa15.48■□□□□ 0.07
GTF2IP1-205ENST00000618412 CUX2O14529 1486 aa15.46■□□□□ 0.07
GTF2IP1-205ENST00000618412 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
GTF2IP1-205ENST00000618412 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
GTF2IP1-205ENST00000618412 ATAD2BQ9ULI0 1458 aa15.43■□□□□ 0.06
GTF2IP1-205ENST00000618412 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
GTF2IP1-205ENST00000618412 SMARCA4P51532 1647 aa15.42■□□□□ 0.06
GTF2IP1-205ENST00000618412 PEG3Q9GZU2 1588 aa15.35■□□□□ 0.05
GTF2IP1-205ENST00000618412 ERCC6Q03468 1493 aa15.33■□□□□ 0.04
GTF2IP1-205ENST00000618412 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
GTF2IP1-205ENST00000618412 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.04
GTF2IP1-205ENST00000618412 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
GTF2IP1-205ENST00000618412 MYT1Q01538 1121 aa15.24■□□□□ 0.03
GTF2IP1-205ENST00000618412 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
GTF2IP1-205ENST00000618412 LAMC3Q9Y6N6 1575 aa15.22■□□□□ 0.03
GTF2IP1-205ENST00000618412 NESP48681 1621 aa15.21■□□□□ 0.03
GTF2IP1-205ENST00000618412 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.02
GTF2IP1-205ENST00000618412 ACIN1Q9UKV3 1341 aaKnown RBP15.21■□□□□ 0.02
GTF2IP1-205ENST00000618412 GTF3C3Q9Y5Q9 886 aa15.15■□□□□ 0.02
GTF2IP1-205ENST00000618412 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
GTF2IP1-205ENST00000618412 KIF21AQ7Z4S6 1674 aa15.11■□□□□ 0.01
GTF2IP1-205ENST00000618412 PDS5BQ9NTI5 1447 aa15.06■□□□□ 0
GTF2IP1-205ENST00000618412 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
GTF2IP1-205ENST00000618412 WDR62O43379 1518 aa14.97□□□□□ -0.01
GTF2IP1-205ENST00000618412 WIZO95785 1651 aa14.97□□□□□ -0.01
GTF2IP1-205ENST00000618412 EHMT2Q96KQ7 1210 aa14.96□□□□□ -0.02
GTF2IP1-205ENST00000618412 MRC2Q9UBG0 1479 aa14.96□□□□□ -0.02
GTF2IP1-205ENST00000618412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
GTF2IP1-205ENST00000618412 CENPBP07199 599 aaPredicted RBP14.92□□□□□ -0.02
GTF2IP1-205ENST00000618412 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
GTF2IP1-205ENST00000618412 DIEXFQ68CQ4 756 aaKnown RBP14.89□□□□□ -0.03
GTF2IP1-205ENST00000618412 CEP164Q9UPV0 1460 aa14.86□□□□□ -0.03
GTF2IP1-205ENST00000618412 CFTRP13569 1480 aa14.84□□□□□ -0.03
GTF2IP1-205ENST00000618412 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
GTF2IP1-205ENST00000618412 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
GTF2IP1-205ENST00000618412 CCER1Q8TC90 406 aaPredicted RBP14.82□□□□□ -0.04
GTF2IP1-205ENST00000618412 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
GTF2IP1-205ENST00000618412 RSF1Q96T23 1441 aaPredicted RBP14.79□□□□□ -0.04
GTF2IP1-205ENST00000618412 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
GTF2IP1-205ENST00000618412 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
GTF2IP1-205ENST00000618412 URB2Q14146 1524 aaKnown RBP14.72□□□□□ -0.05
GTF2IP1-205ENST00000618412 TTBK1Q5TCY1 1321 aaPredicted RBP14.62□□□□□ -0.07
GTF2IP1-205ENST00000618412 OSCARQ8IYS5 282 aa14.61□□□□□ -0.07
GTF2IP1-205ENST00000618412 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
GTF2IP1-205ENST00000618412 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
GTF2IP1-205ENST00000618412 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
GTF2IP1-205ENST00000618412 TOPBP1Q92547 1522 aa14.55□□□□□ -0.08
GTF2IP1-205ENST00000618412 MIER1Q8N108 512 aa14.54□□□□□ -0.08
GTF2IP1-205ENST00000618412 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
GTF2IP1-205ENST00000618412 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.09
GTF2IP1-205ENST00000618412 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.09
GTF2IP1-205ENST00000618412 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.09
GTF2IP1-205ENST00000618412 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.09
GTF2IP1-205ENST00000618412 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
GTF2IP1-205ENST00000618412 BCL11AQ9H165 835 aa14.51□□□□□ -0.09
GTF2IP1-205ENST00000618412 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
GTF2IP1-205ENST00000618412 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
GTF2IP1-205ENST00000618412 ARHGEF11O15085 1522 aa14.44□□□□□ -0.1
GTF2IP1-205ENST00000618412 CHD1O14646 1710 aa14.42□□□□□ -0.1
GTF2IP1-205ENST00000618412 WDR97A6NE52 1622 aa14.42□□□□□ -0.1
GTF2IP1-205ENST00000618412 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
GTF2IP1-205ENST00000618412 POLA1P09884 1462 aaPredicted RBP14.38□□□□□ -0.11
GTF2IP1-205ENST00000618412 SUPT16HQ9Y5B9 1047 aaKnown RBP14.36□□□□□ -0.11
GTF2IP1-205ENST00000618412 AQRO60306 1485 aaKnown RBP eCLIP14.34□□□□□ -0.11
GTF2IP1-205ENST00000618412 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
GTF2IP1-205ENST00000618412 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
GTF2IP1-205ENST00000618412 ARAP1Q96P48 1450 aa14.28□□□□□ -0.12
GTF2IP1-205ENST00000618412 CLASP1Q7Z460 1538 aa14.28□□□□□ -0.12
GTF2IP1-205ENST00000618412 SOGA1O94964 1423 aa14.28□□□□□ -0.12
GTF2IP1-205ENST00000618412 RAD54L2Q9Y4B4 1467 aa14.27□□□□□ -0.12
GTF2IP1-205ENST00000618412 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
GTF2IP1-205ENST00000618412 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
GTF2IP1-205ENST00000618412 CUX1P39880 1505 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms