RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PELP1Q8IZL8 1130 aaKnown RBP15.17■□□□□ 0.02
HMGB4-204ENST00000522796 MYT1Q01538 1121 aa15.1■□□□□ 0.01
HMGB4-204ENST00000522796 TTBK1Q5TCY1 1321 aaPredicted RBP14.7□□□□□ -0.06
HMGB4-204ENST00000522796 SLC24A1O60721 1099 aa14.69□□□□□ -0.06
HMGB4-204ENST00000522796 PRKCSHP14314 528 aaPredicted RBP14.41□□□□□ -0.1
HMGB4-204ENST00000522796 APLP2Q06481 763 aa14.18□□□□□ -0.14
HMGB4-204ENST00000522796 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
HMGB4-204ENST00000522796 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
HMGB4-204ENST00000522796 HRCP23327 699 aa13.86□□□□□ -0.19
HMGB4-204ENST00000522796 BCL11AQ9H165 835 aa13.69□□□□□ -0.22
HMGB4-204ENST00000522796 SCAF1Q9H7N4 1312 aaKnown RBP13.61□□□□□ -0.23
HMGB4-204ENST00000522796 FAM9AQ8IZU1 332 aaPredicted RBP13.48□□□□□ -0.25
HMGB4-204ENST00000522796 EIF5BO60841 1220 aaKnown RBP13.35□□□□□ -0.27
HMGB4-204ENST00000522796 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
HMGB4-204ENST00000522796 CENPBP07199 599 aaPredicted RBP13.2□□□□□ -0.3
HMGB4-204ENST00000522796 ACIN1Q9UKV3 1341 aaKnown RBP13.02□□□□□ -0.32
HMGB4-204ENST00000522796 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
HMGB4-204ENST00000522796 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
HMGB4-204ENST00000522796 ANP32EQ9BTT0 268 aa12.9□□□□□ -0.34
HMGB4-204ENST00000522796 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
HMGB4-204ENST00000522796 GTF3C3Q9Y5Q9 886 aa12.89□□□□□ -0.35
HMGB4-204ENST00000522796 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
HMGB4-204ENST00000522796 UBE2Q2Q8WVN8 375 aa12.83□□□□□ -0.36
HMGB4-204ENST00000522796 ZEB1P37275 1124 aaPredicted RBP12.82□□□□□ -0.36
HMGB4-204ENST00000522796 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
HMGB4-204ENST00000522796 NISCHQ9Y2I1 1504 aa12.73□□□□□ -0.37
HMGB4-204ENST00000522796 ARXQ96QS3 562 aa12.72□□□□□ -0.37
HMGB4-204ENST00000522796 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
HMGB4-204ENST00000522796 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
HMGB4-204ENST00000522796 PLPPR3Q6T4P5 718 aa12.64□□□□□ -0.39
HMGB4-204ENST00000522796 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
HMGB4-204ENST00000522796 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
HMGB4-204ENST00000522796 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
HMGB4-204ENST00000522796 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
HMGB4-204ENST00000522796 PKNOX2Q96KN3 472 aa12.55□□□□□ -0.4
HMGB4-204ENST00000522796 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
HMGB4-204ENST00000522796 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
HMGB4-204ENST00000522796 DCAF1Q9Y4B6 1507 aa12.46□□□□□ -0.41
HMGB4-204ENST00000522796 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.42
HMGB4-204ENST00000522796 PDIA4P13667 645 aaKnown RBP12.38□□□□□ -0.43
HMGB4-204ENST00000522796 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
HMGB4-204ENST00000522796 NEFLP07196 543 aa12.32□□□□□ -0.44
HMGB4-204ENST00000522796 PDE4CQ08493 712 aa12.31□□□□□ -0.44
HMGB4-204ENST00000522796 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
HMGB4-204ENST00000522796 TSHZ2Q9NRE2 1034 aa12.3□□□□□ -0.44
HMGB4-204ENST00000522796 HOMEZQ8IX15 550 aa12.28□□□□□ -0.44
HMGB4-204ENST00000522796 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.45
HMGB4-204ENST00000522796 AEBP2Q6ZN18 517 aaPredicted RBP12.27□□□□□ -0.45
HMGB4-204ENST00000522796 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
HMGB4-204ENST00000522796 MYT1LQ9UL68 1186 aa12.24□□□□□ -0.45
HMGB4-204ENST00000522796 SALL2Q9Y467 1007 aaPredicted RBP12.24□□□□□ -0.45
HMGB4-204ENST00000522796 DIEXFQ68CQ4 756 aaKnown RBP12.19□□□□□ -0.46
HMGB4-204ENST00000522796 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
HMGB4-204ENST00000522796 FGD1P98174 961 aa12.11□□□□□ -0.47
HMGB4-204ENST00000522796 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
HMGB4-204ENST00000522796 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
HMGB4-204ENST00000522796 TAF7LQ5H9L4 462 aa12.07□□□□□ -0.48
HMGB4-204ENST00000522796 SUPT16HQ9Y5B9 1047 aaKnown RBP12.07□□□□□ -0.48
HMGB4-204ENST00000522796 NPM2Q86SE8 214 aaKnown RBP12.01□□□□□ -0.49
HMGB4-204ENST00000522796 DEKP35659 375 aaKnown RBP12.01□□□□□ -0.49
HMGB4-204ENST00000522796 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
HMGB4-204ENST00000522796 CHMP4AQ9BY43 222 aa11.94□□□□□ -0.5
HMGB4-204ENST00000522796 A0A0U1RQG5 324 aaPredicted RBP11.93□□□□□ -0.5
HMGB4-204ENST00000522796 AAMPQ13685 434 aa11.93□□□□□ -0.5
HMGB4-204ENST00000522796 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
HMGB4-204ENST00000522796 CHIC1Q5VXU3 224 aa11.92□□□□□ -0.5
HMGB4-204ENST00000522796 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
HMGB4-204ENST00000522796 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.91□□□□□ -0.5
HMGB4-204ENST00000522796 RBM19Q9Y4C8 960 aaKnown RBP11.9□□□□□ -0.5
HMGB4-204ENST00000522796 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
HMGB4-204ENST00000522796 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
HMGB4-204ENST00000522796 MSH5O43196 834 aa11.88□□□□□ -0.51
HMGB4-204ENST00000522796 BRD2P25440 801 aaKnown RBP11.88□□□□□ -0.51
HMGB4-204ENST00000522796 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
HMGB4-204ENST00000522796 HAP1P54257 671 aaPredicted RBP11.84□□□□□ -0.51
HMGB4-204ENST00000522796 GLIPR1L2Q4G1C9 344 aa11.84□□□□□ -0.51
HMGB4-204ENST00000522796 RBM10P98175 930 aaKnown RBP11.83□□□□□ -0.52
HMGB4-204ENST00000522796 ZMYND15Q9H091 742 aa11.83□□□□□ -0.52
HMGB4-204ENST00000522796 FANCIQ9NVI1 1328 aa11.82□□□□□ -0.52
HMGB4-204ENST00000522796 SAMD1Q6SPF0 538 aaPredicted RBP11.82□□□□□ -0.52
HMGB4-204ENST00000522796 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
HMGB4-204ENST00000522796 RSPH4AQ5TD94 716 aa11.76□□□□□ -0.53
HMGB4-204ENST00000522796 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
HMGB4-204ENST00000522796 PAXIP1Q6ZW49 1069 aaPredicted RBP11.74□□□□□ -0.53
HMGB4-204ENST00000522796 IL27Q8NEV9 243 aa11.74□□□□□ -0.53
HMGB4-204ENST00000522796 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
HMGB4-204ENST00000522796 MIER1Q8N108 512 aa11.72□□□□□ -0.53
HMGB4-204ENST00000522796 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
HMGB4-204ENST00000522796 KCNA4P22459 653 aa11.71□□□□□ -0.53
HMGB4-204ENST00000522796 ZNF326Q5BKZ1 582 aaKnown RBP11.69□□□□□ -0.54
HMGB4-204ENST00000522796 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
HMGB4-204ENST00000522796 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
HMGB4-204ENST00000522796 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.54
HMGB4-204ENST00000522796 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
HMGB4-204ENST00000522796 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
HMGB4-204ENST00000522796 DCAF8L2P0C7V8 631 aa11.59□□□□□ -0.55
HMGB4-204ENST00000522796 CDK11AQ9UQ88 783 aaPredicted RBP11.58□□□□□ -0.56
HMGB4-204ENST00000522796 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
HMGB4-204ENST00000522796 BCANQ96GW7 911 aa11.58□□□□□ -0.56
HMGB4-204ENST00000522796 C11orf95C9JLR9 678 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms