RNA–Protein interactions for RNA: ENST00000503414.5

SPARCL1-205, Transcript of SPARC like 1, humanhuman

TSL 2 BASIC

Gene SPARCL1, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-205ENST00000503414 NISCHQ9Y2I1 1504 aa14.93□□□□□ -0.02
SPARCL1-205ENST00000503414 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
SPARCL1-205ENST00000503414 MYT1Q01538 1121 aa13.54□□□□□ -0.24
SPARCL1-205ENST00000503414 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
SPARCL1-205ENST00000503414 CCDC180Q9P1Z9 1646 aa12.9□□□□□ -0.34
SPARCL1-205ENST00000503414 DCAF8L2P0C7V8 631 aa12.63□□□□□ -0.39
SPARCL1-205ENST00000503414 ABCC9O60706 1549 aa12.57□□□□□ -0.4
SPARCL1-205ENST00000503414 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
SPARCL1-205ENST00000503414 HRCP23327 699 aa12.49□□□□□ -0.41
SPARCL1-205ENST00000503414 SHROOM4Q9ULL8 1493 aa12.37□□□□□ -0.43
SPARCL1-205ENST00000503414 ERICH6Q7L0X2 663 aa12.35□□□□□ -0.43
SPARCL1-205ENST00000503414 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
SPARCL1-205ENST00000503414 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.45
SPARCL1-205ENST00000503414 APLP2Q06481 763 aa12.16□□□□□ -0.46
SPARCL1-205ENST00000503414 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
SPARCL1-205ENST00000503414 NACADO15069 1562 aa12.1□□□□□ -0.47
SPARCL1-205ENST00000503414 MYO15BQ96JP2 1530 aa12.08□□□□□ -0.48
SPARCL1-205ENST00000503414 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
SPARCL1-205ENST00000503414 SCRIBQ14160 1630 aa12.06□□□□□ -0.48
SPARCL1-205ENST00000503414 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
SPARCL1-205ENST00000503414 RB1CC1Q8TDY2 1594 aa12.03□□□□□ -0.48
SPARCL1-205ENST00000503414 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPARCL1-205ENST00000503414 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
SPARCL1-205ENST00000503414 PPARGC1BQ86YN6 1023 aaKnown RBP11.87□□□□□ -0.51
SPARCL1-205ENST00000503414 FAM9AQ8IZU1 332 aaPredicted RBP11.85□□□□□ -0.51
SPARCL1-205ENST00000503414 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
SPARCL1-205ENST00000503414 UNC13AQ9UPW8 1703 aa11.82□□□□□ -0.52
SPARCL1-205ENST00000503414 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
SPARCL1-205ENST00000503414 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
SPARCL1-205ENST00000503414 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
SPARCL1-205ENST00000503414 ZEB1P37275 1124 aaPredicted RBP11.68□□□□□ -0.54
SPARCL1-205ENST00000503414 DAXXQ9UER7 740 aaPredicted RBP11.67□□□□□ -0.54
SPARCL1-205ENST00000503414 PCGF6Q9BYE7 350 aa11.63□□□□□ -0.55
SPARCL1-205ENST00000503414 RSF1Q96T23 1441 aaPredicted RBP11.62□□□□□ -0.55
SPARCL1-205ENST00000503414 MROH2BQ7Z745 1585 aa11.61□□□□□ -0.55
SPARCL1-205ENST00000503414 ANP32EQ9BTT0 268 aa11.59□□□□□ -0.55
SPARCL1-205ENST00000503414 GTF3C3Q9Y5Q9 886 aa11.57□□□□□ -0.56
SPARCL1-205ENST00000503414 NEUROD1Q13562 356 aa11.51□□□□□ -0.57
SPARCL1-205ENST00000503414 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
SPARCL1-205ENST00000503414 WIZO95785 1651 aa11.49□□□□□ -0.57
SPARCL1-205ENST00000503414 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
SPARCL1-205ENST00000503414 EIF5BO60841 1220 aaKnown RBP11.45□□□□□ -0.58
SPARCL1-205ENST00000503414 EIF4G1Q04637 1599 aaKnown RBP11.4□□□□□ -0.58
SPARCL1-205ENST00000503414 ATAD2BQ9ULI0 1458 aa11.36□□□□□ -0.59
SPARCL1-205ENST00000503414 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
SPARCL1-205ENST00000503414 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
SPARCL1-205ENST00000503414 UBE2Q2Q8WVN8 375 aa11.31□□□□□ -0.6
SPARCL1-205ENST00000503414 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
SPARCL1-205ENST00000503414 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
SPARCL1-205ENST00000503414 BAZ1BQ9UIG0 1483 aaKnown RBP11.27□□□□□ -0.6
SPARCL1-205ENST00000503414 PEG3Q9GZU2 1588 aa11.27□□□□□ -0.6
SPARCL1-205ENST00000503414 TOP2AP11388 1531 aaKnown RBP11.27□□□□□ -0.6
SPARCL1-205ENST00000503414 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
SPARCL1-205ENST00000503414 CCDC88BA6NC98 1476 aa11.26□□□□□ -0.61
SPARCL1-205ENST00000503414 SMARCA2P51531 1590 aa11.25□□□□□ -0.61
SPARCL1-205ENST00000503414 NCAPD3P42695 1498 aa11.24□□□□□ -0.61
SPARCL1-205ENST00000503414 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
SPARCL1-205ENST00000503414 CHIC1Q5VXU3 224 aa11.2□□□□□ -0.62
SPARCL1-205ENST00000503414 MYT1LQ9UL68 1186 aa11.17□□□□□ -0.62
SPARCL1-205ENST00000503414 HMGXB3Q12766 1538 aa11.15□□□□□ -0.63
SPARCL1-205ENST00000503414 ERICH6BQ5W0A0 696 aa11.12□□□□□ -0.63
SPARCL1-205ENST00000503414 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
SPARCL1-205ENST00000503414 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
SPARCL1-205ENST00000503414 ABCC8Q09428 1581 aa11.04□□□□□ -0.64
SPARCL1-205ENST00000503414 DIEXFQ68CQ4 756 aaKnown RBP11.04□□□□□ -0.64
SPARCL1-205ENST00000503414 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
SPARCL1-205ENST00000503414 NESP48681 1621 aa11.03□□□□□ -0.64
SPARCL1-205ENST00000503414 PKNOX2Q96KN3 472 aa11.01□□□□□ -0.65
SPARCL1-205ENST00000503414 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
SPARCL1-205ENST00000503414 CADPSQ9ULU8 1353 aa10.99□□□□□ -0.65
SPARCL1-205ENST00000503414 CFTRP13569 1480 aa10.98□□□□□ -0.65
SPARCL1-205ENST00000503414 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
SPARCL1-205ENST00000503414 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
SPARCL1-205ENST00000503414 WRNQ14191 1432 aaPredicted RBP eCLIP10.91□□□□□ -0.66
SPARCL1-205ENST00000503414 LOC105371045A0A1W2PR82 267 aa10.9□□□□□ -0.67
SPARCL1-205ENST00000503414 SALL2Q9Y467 1007 aaPredicted RBP10.88□□□□□ -0.67
SPARCL1-205ENST00000503414 SYNJ1O43426 1573 aa10.88□□□□□ -0.67
SPARCL1-205ENST00000503414 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
SPARCL1-205ENST00000503414 SUPT16HQ9Y5B9 1047 aaKnown RBP10.86□□□□□ -0.67
SPARCL1-205ENST00000503414 SOGA1O94964 1423 aa10.84□□□□□ -0.67
SPARCL1-205ENST00000503414 NEFLP07196 543 aa10.84□□□□□ -0.67
SPARCL1-205ENST00000503414 CUX1P39880 1505 aa10.83□□□□□ -0.68
SPARCL1-205ENST00000503414 RUSC2Q8N2Y8 1516 aa10.83□□□□□ -0.68
SPARCL1-205ENST00000503414 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
SPARCL1-205ENST00000503414 DEKP35659 375 aaKnown RBP10.79□□□□□ -0.68
SPARCL1-205ENST00000503414 PDS5BQ9NTI5 1447 aa10.79□□□□□ -0.68
SPARCL1-205ENST00000503414 CEP164Q9UPV0 1460 aa10.77□□□□□ -0.68
SPARCL1-205ENST00000503414 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
SPARCL1-205ENST00000503414 CCDC136Q96JN2 1154 aa10.76□□□□□ -0.69
SPARCL1-205ENST00000503414 YTHDC1Q96MU7 727 aaKnown RBP10.76□□□□□ -0.69
SPARCL1-205ENST00000503414 KIF21AQ7Z4S6 1674 aa10.76□□□□□ -0.69
SPARCL1-205ENST00000503414 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
SPARCL1-205ENST00000503414 GLIPR1L2Q4G1C9 344 aa10.75□□□□□ -0.69
SPARCL1-205ENST00000503414 RANGAP1P46060 587 aaPredicted RBP10.75□□□□□ -0.69
SPARCL1-205ENST00000503414 PRDM2Q13029 1718 aa10.74□□□□□ -0.69
SPARCL1-205ENST00000503414 FGD5Q6ZNL6 1462 aa10.73□□□□□ -0.69
SPARCL1-205ENST00000503414 RAD54L2Q9Y4B4 1467 aa10.73□□□□□ -0.69
SPARCL1-205ENST00000503414 TOPBP1Q92547 1522 aa10.73□□□□□ -0.69
SPARCL1-205ENST00000503414 ERCC6Q03468 1493 aa10.72□□□□□ -0.69
SPARCL1-205ENST00000503414 RBM19Q9Y4C8 960 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms