Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC3O95833 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLIC3O95833 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.94■□□□□ 0.46
CLIC3O95833 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.94■□□□□ 0.46
CLIC3O95833 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC3O95833 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC3O95833 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC3O95833 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.94■□□□□ 0.46
CLIC3O95833 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC3O95833 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CLIC3O95833 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC3O95833 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLIC3O95833 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLIC3O95833 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLIC3O95833 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.93■□□□□ 0.46
CLIC3O95833 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC3O95833 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC3O95833 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLIC3O95833 AC243732.1-201ENST00000612648 864 ntBASIC17.93■□□□□ 0.46
CLIC3O95833 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CLIC3O95833 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC3O95833 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC3O95833 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.93■□□□□ 0.46
CLIC3O95833 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CLIC3O95833 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLIC3O95833 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC3O95833 AC139713.2-201ENST00000641328 2723 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLIC3O95833 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 AC087633.2-202ENST00000565166 1439 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLIC3O95833 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4L2-201ENST00000561772 1275 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4L6-201ENST00000626483 1275 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4L1-201ENST00000627662 1275 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4L8-201ENST00000629013 1275 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4L3-201ENST00000630187 1275 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4L7-201ENST00000630678 1275 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 DUX4L5-201ENST00000630834 1275 ntBASIC17.92■□□□□ 0.46
CLIC3O95833 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLIC3O95833 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLIC3O95833 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.92■□□□□ 0.46
CLIC3O95833 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLIC3O95833 Z98044.1-201ENST00000632503 1764 ntBASIC17.91■□□□□ 0.46
CLIC3O95833 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLIC3O95833 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIC3O95833 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.91■□□□□ 0.46
CLIC3O95833 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
CLIC3O95833 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIC3O95833 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 AC104187.1-201ENST00000607510 612 ntBASIC17.91■□□□□ 0.46
CLIC3O95833 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.91■□□□□ 0.46
CLIC3O95833 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.91■□□□□ 0.46
CLIC3O95833 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLIC3O95833 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.91■□□□□ 0.46
CLIC3O95833 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC3O95833 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC3O95833 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLIC3O95833 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC3O95833 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC3O95833 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLIC3O95833 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC3O95833 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.9■□□□□ 0.46
CLIC3O95833 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms