Protein–RNA interactions for Protein: O75030

MITF, Microphthalmia-associated transcription factor, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MITFO75030 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MITFO75030 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.87■□□□□ 0.45
MITFO75030 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MITFO75030 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MITFO75030 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MITFO75030 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MITFO75030 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.87■□□□□ 0.45
MITFO75030 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.87■□□□□ 0.45
MITFO75030 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MITFO75030 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.87■□□□□ 0.45
MITFO75030 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.87■□□□□ 0.45
MITFO75030 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MITFO75030 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MITFO75030 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.86■□□□□ 0.45
MITFO75030 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 AC010536.3-201ENST00000620306 533 ntBASIC17.86■□□□□ 0.45
MITFO75030 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.86■□□□□ 0.45
MITFO75030 AC079598.2-202ENST00000546624 1451 ntBASIC17.86■□□□□ 0.45
MITFO75030 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MITFO75030 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.86■□□□□ 0.45
MITFO75030 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MITFO75030 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
MITFO75030 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.85■□□□□ 0.45
MITFO75030 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MITFO75030 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.85■□□□□ 0.45
MITFO75030 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 FZD10-202ENST00000539839 3282 ntBASIC17.85■□□□□ 0.45
MITFO75030 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.85■□□□□ 0.45
MITFO75030 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.85■□□□□ 0.45
MITFO75030 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MITFO75030 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.85■□□□□ 0.45
MITFO75030 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
MITFO75030 AC105020.6-201ENST00000621523 1217 ntBASIC17.85■□□□□ 0.45
MITFO75030 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
MITFO75030 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MITFO75030 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.84■□□□□ 0.45
MITFO75030 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
MITFO75030 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.84■□□□□ 0.45
MITFO75030 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MITFO75030 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MITFO75030 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MITFO75030 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.84■□□□□ 0.45
MITFO75030 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MITFO75030 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MITFO75030 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.84■□□□□ 0.45
MITFO75030 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MITFO75030 MCRIP2P1-201ENST00000394346 511 ntBASIC17.84■□□□□ 0.45
MITFO75030 KRT19P1-201ENST00000405746 1186 ntBASIC17.84■□□□□ 0.45
MITFO75030 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.84■□□□□ 0.45
MITFO75030 YBX1P1-201ENST00000445822 960 ntBASIC17.84■□□□□ 0.45
MITFO75030 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.84■□□□□ 0.45
MITFO75030 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.84■□□□□ 0.45
MITFO75030 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.84■□□□□ 0.45
MITFO75030 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.84■□□□□ 0.45
MITFO75030 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.84■□□□□ 0.45
MITFO75030 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.84■□□□□ 0.45
MITFO75030 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms