Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB43Q86YS6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB43Q86YS6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 PLK5-205ENST00000642079 1969 ntBASIC18.56■□□□□ 0.56
RAB43Q86YS6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 FAM210CP-201ENST00000445714 574 ntBASIC18.56■□□□□ 0.56
RAB43Q86YS6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 AL353708.3-201ENST00000610272 989 ntBASIC18.56■□□□□ 0.56
RAB43Q86YS6 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB43Q86YS6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RAB43Q86YS6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB43Q86YS6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.55■□□□□ 0.56
RAB43Q86YS6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.55■□□□□ 0.56
RAB43Q86YS6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.55■□□□□ 0.56
RAB43Q86YS6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB43Q86YS6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.55■□□□□ 0.56
RAB43Q86YS6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB43Q86YS6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
RAB43Q86YS6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 FP700111.2-201ENST00000619190 1892 ntBASIC18.54■□□□□ 0.56
RAB43Q86YS6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAB43Q86YS6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB43Q86YS6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB43Q86YS6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.53■□□□□ 0.56
RAB43Q86YS6 TSPY15P-201ENST00000457163 923 ntBASIC18.53■□□□□ 0.56
RAB43Q86YS6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms