Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.98□□□□□ -0.17
CHTOPQ9Y3Y2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SMUG1P1-201ENST00000590640 811 ntBASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.97□□□□□ -0.17
CHTOPQ9Y3Y2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 TSPY9P-201ENST00000440215 945 ntBASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 TSPY11P-201ENST00000442607 1045 ntBASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 MIR4787-201ENST00000607364 84 ntBASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 CROCCP2-202ENST00000412962 2773 ntBASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CHTOPQ9Y3Y2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHTOPQ9Y3Y2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHTOPQ9Y3Y2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHTOPQ9Y3Y2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHTOPQ9Y3Y2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHTOPQ9Y3Y2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC13.96□□□□□ -0.18
CHTOPQ9Y3Y2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHTOPQ9Y3Y2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms