Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 LTB4R2-202ENST00000528054 3092 ntBASIC16.15■□□□□ 0.18
COMMD1Q8N668 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 AC116050.2-201ENST00000612102 1779 ntBASIC16.15■□□□□ 0.18
COMMD1Q8N668 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 AC007613.1-201ENST00000572811 2597 ntBASIC16.15■□□□□ 0.18
COMMD1Q8N668 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD1Q8N668 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD1Q8N668 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.14■□□□□ 0.17
COMMD1Q8N668 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 AC093787.1-201ENST00000450396 207 ntBASIC16.14■□□□□ 0.17
COMMD1Q8N668 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD1Q8N668 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
COMMD1Q8N668 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 AL032819.2-201ENST00000624543 2162 ntBASIC16.13■□□□□ 0.17
COMMD1Q8N668 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 MCRIP2P1-201ENST00000394346 511 ntBASIC16.13■□□□□ 0.17
COMMD1Q8N668 BX276092.2-201ENST00000417668 665 ntBASIC16.13■□□□□ 0.17
COMMD1Q8N668 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.13■□□□□ 0.17
COMMD1Q8N668 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD1Q8N668 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.13■□□□□ 0.17
COMMD1Q8N668 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms