Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AC011506.1-201ENST00000474329 610 ntBASIC17.42■□□□□ 0.38
CLDN1O95832 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN1O95832 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.42■□□□□ 0.38
CLDN1O95832 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.42■□□□□ 0.38
CLDN1O95832 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN1O95832 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLDN1O95832 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLDN1O95832 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLDN1O95832 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN1O95832 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN1O95832 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN1O95832 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN1O95832 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLDN1O95832 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLDN1O95832 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN1O95832 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN1O95832 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN1O95832 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN1O95832 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN1O95832 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN1O95832 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN1O95832 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN1O95832 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN1O95832 AL691432.3-201ENST00000621860 400 ntBASIC17.41■□□□□ 0.38
CLDN1O95832 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN1O95832 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN1O95832 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CLDN1O95832 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN1O95832 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
CLDN1O95832 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN1O95832 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN1O95832 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN1O95832 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CLDN1O95832 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN1O95832 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN1O95832 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN1O95832 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN1O95832 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN1O95832 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN1O95832 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CLDN1O95832 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN1O95832 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN1O95832 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLDN1O95832 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN1O95832 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN1O95832 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
CLDN1O95832 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN1O95832 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN1O95832 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN1O95832 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN1O95832 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN1O95832 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN1O95832 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN1O95832 COX11P1-201ENST00000489116 835 ntBASIC17.39■□□□□ 0.37
CLDN1O95832 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN1O95832 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN1O95832 AL445675.2-201ENST00000620291 557 ntBASIC17.39■□□□□ 0.37
CLDN1O95832 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN1O95832 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLDN1O95832 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN1O95832 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN1O95832 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CLDN1O95832 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN1O95832 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN1O95832 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDN1O95832 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.38■□□□□ 0.37
CLDN1O95832 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN1O95832 AC012313.10-201ENST00000623509 926 ntBASIC17.38■□□□□ 0.37
CLDN1O95832 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms