Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 NBPF21P-201ENST00000425093 1451 ntBASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.39■□□□□ 0.85
TCRBV5S1A1TA0A578 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV5S1A1TA0A578 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 AC098818.2-201ENST00000564925 2320 ntBASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 CD99P1-205ENST00000527459 561 ntBASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 PRKY-204ENST00000533551 1019 ntBASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV5S1A1TA0A578 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 C1QL1P1-201ENST00000568105 661 ntBASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 RN7SL471P-201ENST00000580476 299 ntBASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 AC073648.6-201ENST00000641589 218 ntBASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 AC141586.3-201ENST00000562166 1838 ntBASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TCRBV5S1A1TA0A578 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 AC133681.1-201ENST00000465482 601 ntBASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 AL023875.1-201ENST00000640777 796 ntBASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBV5S1A1TA0A578 LINC01465-201ENST00000408887 1940 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms