Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA9Q9Y5H5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA9Q9Y5H5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA9Q9Y5H5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA9Q9Y5H5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHA9Q9Y5H5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHA9Q9Y5H5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA9Q9Y5H5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA9Q9Y5H5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHA9Q9Y5H5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA9Q9Y5H5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA9Q9Y5H5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA9Q9Y5H5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHA9Q9Y5H5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.6■■□□□ 1.53
PCDHA9Q9Y5H5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA9Q9Y5H5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA9Q9Y5H5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA9Q9Y5H5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHA9Q9Y5H5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PCDHA9Q9Y5H5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHA9Q9Y5H5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA9Q9Y5H5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHA9Q9Y5H5 AC127502.1-201ENST00000399971 1502 ntBASIC24.58■■□□□ 1.53
PCDHA9Q9Y5H5 AL162393.1-201ENST00000437852 946 ntBASIC24.58■■□□□ 1.53
PCDHA9Q9Y5H5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDHA9Q9Y5H5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.58■■□□□ 1.52
PCDHA9Q9Y5H5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHA9Q9Y5H5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHA9Q9Y5H5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
PCDHA9Q9Y5H5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA9Q9Y5H5 AC108673.1-201ENST00000510422 1159 ntBASIC24.56■■□□□ 1.52
PCDHA9Q9Y5H5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA9Q9Y5H5 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHA9Q9Y5H5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA9Q9Y5H5 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA9Q9Y5H5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHA9Q9Y5H5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHA9Q9Y5H5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
PCDHA9Q9Y5H5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHA9Q9Y5H5 BX255925.1-201ENST00000566954 1854 ntBASIC24.54■■□□□ 1.52
PCDHA9Q9Y5H5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PCDHA9Q9Y5H5 AC087741.3-201ENST00000624270 1347 ntBASIC24.54■■□□□ 1.52
PCDHA9Q9Y5H5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHA9Q9Y5H5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.53■■□□□ 1.52
PCDHA9Q9Y5H5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA9Q9Y5H5 MIR6090-201ENST00000622481 60 ntBASIC24.52■■□□□ 1.52
PCDHA9Q9Y5H5 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA9Q9Y5H5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
PCDHA9Q9Y5H5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA9Q9Y5H5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA9Q9Y5H5 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHA9Q9Y5H5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA9Q9Y5H5 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA9Q9Y5H5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA9Q9Y5H5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
PCDHA9Q9Y5H5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHA9Q9Y5H5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PCDHA9Q9Y5H5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHA9Q9Y5H5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA9Q9Y5H5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PCDHA9Q9Y5H5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA9Q9Y5H5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA9Q9Y5H5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
PCDHA9Q9Y5H5 AP004833.2-201ENST00000532228 1454 ntBASIC24.48■■□□□ 1.51
PCDHA9Q9Y5H5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PCDHA9Q9Y5H5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.47■■□□□ 1.51
PCDHA9Q9Y5H5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA9Q9Y5H5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA9Q9Y5H5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA9Q9Y5H5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA9Q9Y5H5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA9Q9Y5H5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA9Q9Y5H5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDHA9Q9Y5H5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA9Q9Y5H5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDHA9Q9Y5H5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.46■■□□□ 1.51
PCDHA9Q9Y5H5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.45■■□□□ 1.51
PCDHA9Q9Y5H5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA9Q9Y5H5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDHA9Q9Y5H5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA9Q9Y5H5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.44■■□□□ 1.5
PCDHA9Q9Y5H5 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHA9Q9Y5H5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
PCDHA9Q9Y5H5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.43■■□□□ 1.5
PCDHA9Q9Y5H5 AC044849.2-201ENST00000606596 710 ntBASIC24.43■■□□□ 1.5
PCDHA9Q9Y5H5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.42■■□□□ 1.5
PCDHA9Q9Y5H5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PCDHA9Q9Y5H5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHA9Q9Y5H5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA9Q9Y5H5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA9Q9Y5H5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHA9Q9Y5H5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms