Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
MMP25Q9NPA2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
MMP25Q9NPA2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.01■■□□□ 1.43
MMP25Q9NPA2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.01■■□□□ 1.43
MMP25Q9NPA2 MIR4449-201ENST00000578365 66 ntBASIC24.01■■□□□ 1.43
MMP25Q9NPA2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
MMP25Q9NPA2 ABCB10P3-201ENST00000561950 2166 ntBASIC23.99■■□□□ 1.43
MMP25Q9NPA2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MMP25Q9NPA2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
MMP25Q9NPA2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
MMP25Q9NPA2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MMP25Q9NPA2 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.98■■□□□ 1.43
MMP25Q9NPA2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MMP25Q9NPA2 AC135983.2-203ENST00000454486 1613 ntBASIC23.98■■□□□ 1.43
MMP25Q9NPA2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
MMP25Q9NPA2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
MMP25Q9NPA2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
MMP25Q9NPA2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
MMP25Q9NPA2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
MMP25Q9NPA2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP25Q9NPA2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP25Q9NPA2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
MMP25Q9NPA2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP25Q9NPA2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMP25Q9NPA2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
MMP25Q9NPA2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
MMP25Q9NPA2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
MMP25Q9NPA2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MMP25Q9NPA2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MMP25Q9NPA2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
MMP25Q9NPA2 WHAMMP2-203ENST00000563942 1603 ntBASIC23.93■■□□□ 1.42
MMP25Q9NPA2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.93■■□□□ 1.42
MMP25Q9NPA2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMP25Q9NPA2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMP25Q9NPA2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
MMP25Q9NPA2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MMP25Q9NPA2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
MMP25Q9NPA2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MMP25Q9NPA2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.89■■□□□ 1.41
MMP25Q9NPA2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
MMP25Q9NPA2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MMP25Q9NPA2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MMP25Q9NPA2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.88■■□□□ 1.41
MMP25Q9NPA2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
MMP25Q9NPA2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMP25Q9NPA2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.87■■□□□ 1.41
MMP25Q9NPA2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMP25Q9NPA2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
MMP25Q9NPA2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MMP25Q9NPA2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
MMP25Q9NPA2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.86■■□□□ 1.41
MMP25Q9NPA2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
MMP25Q9NPA2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.86■■□□□ 1.41
MMP25Q9NPA2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.86■■□□□ 1.41
MMP25Q9NPA2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
MMP25Q9NPA2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MMP25Q9NPA2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
MMP25Q9NPA2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
MMP25Q9NPA2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
MMP25Q9NPA2 AC139426.1-201ENST00000568218 2529 ntBASIC23.85■■□□□ 1.41
MMP25Q9NPA2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.84■■□□□ 1.41
MMP25Q9NPA2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
MMP25Q9NPA2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.84■■□□□ 1.41
MMP25Q9NPA2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.84■■□□□ 1.41
MMP25Q9NPA2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
MMP25Q9NPA2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
MMP25Q9NPA2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
MMP25Q9NPA2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
MMP25Q9NPA2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP25Q9NPA2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.82■■□□□ 1.4
MMP25Q9NPA2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.82■■□□□ 1.4
MMP25Q9NPA2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MMP25Q9NPA2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
MMP25Q9NPA2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP25Q9NPA2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MMP25Q9NPA2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MMP25Q9NPA2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP25Q9NPA2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MMP25Q9NPA2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MMP25Q9NPA2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
MMP25Q9NPA2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.8■■□□□ 1.4
MMP25Q9NPA2 AP004833.2-201ENST00000532228 1454 ntBASIC23.8■■□□□ 1.4
MMP25Q9NPA2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MMP25Q9NPA2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.79■■□□□ 1.4
MMP25Q9NPA2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.79■■□□□ 1.4
MMP25Q9NPA2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.79■■□□□ 1.4
MMP25Q9NPA2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.79■■□□□ 1.4
MMP25Q9NPA2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
MMP25Q9NPA2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
MMP25Q9NPA2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
MMP25Q9NPA2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
MMP25Q9NPA2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MMP25Q9NPA2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MMP25Q9NPA2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
MMP25Q9NPA2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
MMP25Q9NPA2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP25Q9NPA2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MMP25Q9NPA2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MMP25Q9NPA2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.76■■□□□ 1.39
MMP25Q9NPA2 AC110285.7-201ENST00000624417 1536 ntBASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms