Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.18■■□□□ 1.94
CSNK1G1Q9HCP0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CSNK1G1Q9HCP0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CSNK1G1Q9HCP0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CSNK1G1Q9HCP0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CSNK1G1Q9HCP0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CSNK1G1Q9HCP0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CSNK1G1Q9HCP0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
CSNK1G1Q9HCP0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CSNK1G1Q9HCP0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CSNK1G1Q9HCP0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
CSNK1G1Q9HCP0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CSNK1G1Q9HCP0 AL139393.2-201ENST00000608721 2025 ntBASIC27.15■■□□□ 1.94
CSNK1G1Q9HCP0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.14■■□□□ 1.94
CSNK1G1Q9HCP0 AC016575.1-201ENST00000607026 382 ntBASIC27.14■■□□□ 1.94
CSNK1G1Q9HCP0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
CSNK1G1Q9HCP0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CSNK1G1Q9HCP0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.13■■□□□ 1.93
CSNK1G1Q9HCP0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CSNK1G1Q9HCP0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CSNK1G1Q9HCP0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CSNK1G1Q9HCP0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.12■■□□□ 1.93
CSNK1G1Q9HCP0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CSNK1G1Q9HCP0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CSNK1G1Q9HCP0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CSNK1G1Q9HCP0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.11■■□□□ 1.93
CSNK1G1Q9HCP0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.11■■□□□ 1.93
CSNK1G1Q9HCP0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CSNK1G1Q9HCP0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CSNK1G1Q9HCP0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.1■■□□□ 1.93
CSNK1G1Q9HCP0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CSNK1G1Q9HCP0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.1■■□□□ 1.93
CSNK1G1Q9HCP0 HLA-V-202ENST00000446817 847 ntBASIC27.09■■□□□ 1.93
CSNK1G1Q9HCP0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.09■■□□□ 1.93
CSNK1G1Q9HCP0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.09■■□□□ 1.93
CSNK1G1Q9HCP0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CSNK1G1Q9HCP0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.09■■□□□ 1.93
CSNK1G1Q9HCP0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.09■■□□□ 1.93
CSNK1G1Q9HCP0 MIR639-201ENST00000384974 98 ntBASIC27.08■■□□□ 1.93
CSNK1G1Q9HCP0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CSNK1G1Q9HCP0 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.07■■□□□ 1.92
CSNK1G1Q9HCP0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CSNK1G1Q9HCP0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
CSNK1G1Q9HCP0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CSNK1G1Q9HCP0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.05■■□□□ 1.92
CSNK1G1Q9HCP0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CSNK1G1Q9HCP0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.05■■□□□ 1.92
CSNK1G1Q9HCP0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CSNK1G1Q9HCP0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.03■■□□□ 1.92
CSNK1G1Q9HCP0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.03■■□□□ 1.92
CSNK1G1Q9HCP0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CSNK1G1Q9HCP0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CSNK1G1Q9HCP0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CSNK1G1Q9HCP0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.02■■□□□ 1.92
CSNK1G1Q9HCP0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
CSNK1G1Q9HCP0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.02■■□□□ 1.92
CSNK1G1Q9HCP0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
CSNK1G1Q9HCP0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CSNK1G1Q9HCP0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CSNK1G1Q9HCP0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.01■■□□□ 1.91
CSNK1G1Q9HCP0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
CSNK1G1Q9HCP0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CSNK1G1Q9HCP0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27■■□□□ 1.91
CSNK1G1Q9HCP0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27■■□□□ 1.91
CSNK1G1Q9HCP0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CSNK1G1Q9HCP0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.98■■□□□ 1.91
CSNK1G1Q9HCP0 AC100797.4-201ENST00000631653 1827 ntBASIC26.97■■□□□ 1.91
CSNK1G1Q9HCP0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.97■■□□□ 1.91
CSNK1G1Q9HCP0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.97■■□□□ 1.91
CSNK1G1Q9HCP0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CSNK1G1Q9HCP0 AC110285.7-201ENST00000624417 1536 ntBASIC26.96■■□□□ 1.91
CSNK1G1Q9HCP0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
CSNK1G1Q9HCP0 MIR4449-201ENST00000578365 66 ntBASIC26.96■■□□□ 1.91
CSNK1G1Q9HCP0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
CSNK1G1Q9HCP0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.91
CSNK1G1Q9HCP0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
CSNK1G1Q9HCP0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
CSNK1G1Q9HCP0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
CSNK1G1Q9HCP0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CSNK1G1Q9HCP0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.94■■□□□ 1.9
CSNK1G1Q9HCP0 ABCB10P3-201ENST00000561950 2166 ntBASIC26.94■■□□□ 1.9
CSNK1G1Q9HCP0 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSNK1G1Q9HCP0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.93■■□□□ 1.9
CSNK1G1Q9HCP0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
CSNK1G1Q9HCP0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CSNK1G1Q9HCP0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.92■■□□□ 1.9
CSNK1G1Q9HCP0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CSNK1G1Q9HCP0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.92■■□□□ 1.9
CSNK1G1Q9HCP0 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CSNK1G1Q9HCP0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CSNK1G1Q9HCP0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.91■■□□□ 1.9
CSNK1G1Q9HCP0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CSNK1G1Q9HCP0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.9■■□□□ 1.9
CSNK1G1Q9HCP0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSNK1G1Q9HCP0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSNK1G1Q9HCP0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
CSNK1G1Q9HCP0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.89■■□□□ 1.89
CSNK1G1Q9HCP0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CSNK1G1Q9HCP0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CSNK1G1Q9HCP0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms