Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.01■□□□□ 0.95
S1PR3Q99500 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
S1PR3Q99500 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.01■□□□□ 0.95
S1PR3Q99500 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
S1PR3Q99500 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
S1PR3Q99500 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
S1PR3Q99500 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21■□□□□ 0.95
S1PR3Q99500 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
S1PR3Q99500 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
S1PR3Q99500 AC087741.3-201ENST00000624270 1347 ntBASIC20.99■□□□□ 0.95
S1PR3Q99500 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
S1PR3Q99500 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
S1PR3Q99500 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.97■□□□□ 0.95
S1PR3Q99500 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
S1PR3Q99500 RPS2P35-201ENST00000443417 897 ntBASIC20.97■□□□□ 0.95
S1PR3Q99500 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
S1PR3Q99500 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
S1PR3Q99500 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.96■□□□□ 0.95
S1PR3Q99500 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
S1PR3Q99500 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
S1PR3Q99500 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
S1PR3Q99500 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.96■□□□□ 0.95
S1PR3Q99500 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
S1PR3Q99500 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
S1PR3Q99500 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.95■□□□□ 0.94
S1PR3Q99500 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
S1PR3Q99500 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
S1PR3Q99500 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
S1PR3Q99500 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
S1PR3Q99500 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.94■□□□□ 0.94
S1PR3Q99500 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
S1PR3Q99500 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
S1PR3Q99500 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
S1PR3Q99500 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
S1PR3Q99500 AC044849.2-201ENST00000606596 710 ntBASIC20.93■□□□□ 0.94
S1PR3Q99500 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
S1PR3Q99500 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
S1PR3Q99500 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
S1PR3Q99500 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.93■□□□□ 0.94
S1PR3Q99500 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
S1PR3Q99500 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
S1PR3Q99500 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
S1PR3Q99500 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.91■□□□□ 0.94
S1PR3Q99500 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
S1PR3Q99500 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
S1PR3Q99500 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.9■□□□□ 0.94
S1PR3Q99500 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
S1PR3Q99500 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
S1PR3Q99500 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
S1PR3Q99500 MIR6090-201ENST00000622481 60 ntBASIC20.89■□□□□ 0.93
S1PR3Q99500 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.89■□□□□ 0.93
S1PR3Q99500 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
S1PR3Q99500 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
S1PR3Q99500 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
S1PR3Q99500 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.88■□□□□ 0.93
S1PR3Q99500 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
S1PR3Q99500 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
S1PR3Q99500 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.88■□□□□ 0.93
S1PR3Q99500 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
S1PR3Q99500 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
S1PR3Q99500 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
S1PR3Q99500 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
S1PR3Q99500 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.87■□□□□ 0.93
S1PR3Q99500 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
S1PR3Q99500 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
S1PR3Q99500 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
S1PR3Q99500 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
S1PR3Q99500 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
S1PR3Q99500 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
S1PR3Q99500 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
S1PR3Q99500 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
S1PR3Q99500 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
S1PR3Q99500 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
S1PR3Q99500 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.85■□□□□ 0.93
S1PR3Q99500 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.85■□□□□ 0.93
S1PR3Q99500 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
S1PR3Q99500 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
S1PR3Q99500 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
S1PR3Q99500 AC100797.4-201ENST00000631653 1827 ntBASIC20.84■□□□□ 0.93
S1PR3Q99500 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
S1PR3Q99500 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.83■□□□□ 0.93
S1PR3Q99500 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
S1PR3Q99500 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
S1PR3Q99500 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
S1PR3Q99500 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
S1PR3Q99500 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
S1PR3Q99500 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
S1PR3Q99500 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
S1PR3Q99500 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
S1PR3Q99500 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
S1PR3Q99500 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms