Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DUX3Q96PT4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.91■□□□□ 0.78
DUX3Q96PT4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DUX3Q96PT4 WHAMMP2-203ENST00000563942 1603 ntBASIC19.9■□□□□ 0.78
DUX3Q96PT4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DUX3Q96PT4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
DUX3Q96PT4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DUX3Q96PT4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DUX3Q96PT4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
DUX3Q96PT4 ST7-AS1-201ENST00000456775 1889 ntBASIC19.88■□□□□ 0.77
DUX3Q96PT4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DUX3Q96PT4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX3Q96PT4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DUX3Q96PT4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX3Q96PT4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DUX3Q96PT4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.86■□□□□ 0.77
DUX3Q96PT4 AC135983.2-203ENST00000454486 1613 ntBASIC19.86■□□□□ 0.77
DUX3Q96PT4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
DUX3Q96PT4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
DUX3Q96PT4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.85■□□□□ 0.77
DUX3Q96PT4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.85■□□□□ 0.77
DUX3Q96PT4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.85■□□□□ 0.77
DUX3Q96PT4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
DUX3Q96PT4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX3Q96PT4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DUX3Q96PT4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DUX3Q96PT4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DUX3Q96PT4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DUX3Q96PT4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DUX3Q96PT4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DUX3Q96PT4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUX3Q96PT4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUX3Q96PT4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DUX3Q96PT4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DUX3Q96PT4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DUX3Q96PT4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DUX3Q96PT4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DUX3Q96PT4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.8■□□□□ 0.76
DUX3Q96PT4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.79■□□□□ 0.76
DUX3Q96PT4 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.79■□□□□ 0.76
DUX3Q96PT4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUX3Q96PT4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUX3Q96PT4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.78■□□□□ 0.76
DUX3Q96PT4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
DUX3Q96PT4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
DUX3Q96PT4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DUX3Q96PT4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
DUX3Q96PT4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.77■□□□□ 0.76
DUX3Q96PT4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.77■□□□□ 0.76
DUX3Q96PT4 HSD17B1P1-201ENST00000590052 955 ntBASIC19.77■□□□□ 0.76
DUX3Q96PT4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
DUX3Q96PT4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.76■□□□□ 0.75
DUX3Q96PT4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.76■□□□□ 0.75
DUX3Q96PT4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
DUX3Q96PT4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
DUX3Q96PT4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DUX3Q96PT4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
DUX3Q96PT4 ABCB10P1-201ENST00000614297 2181 ntBASIC19.75■□□□□ 0.75
DUX3Q96PT4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
DUX3Q96PT4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
DUX3Q96PT4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.74■□□□□ 0.75
DUX3Q96PT4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
DUX3Q96PT4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 AC110285.7-201ENST00000624417 1536 ntBASIC19.73■□□□□ 0.75
DUX3Q96PT4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
DUX3Q96PT4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX3Q96PT4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX3Q96PT4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX3Q96PT4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
DUX3Q96PT4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX3Q96PT4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DUX3Q96PT4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX3Q96PT4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.71■□□□□ 0.75
DUX3Q96PT4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX3Q96PT4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DUX3Q96PT4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.71■□□□□ 0.75
DUX3Q96PT4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX3Q96PT4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
DUX3Q96PT4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
DUX3Q96PT4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.71■□□□□ 0.75
DUX3Q96PT4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
DUX3Q96PT4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.71■□□□□ 0.75
DUX3Q96PT4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
DUX3Q96PT4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX3Q96PT4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DUX3Q96PT4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
DUX3Q96PT4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.7■□□□□ 0.74
DUX3Q96PT4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX3Q96PT4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms