Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
SLC44A5Q8NCS7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SLC44A5Q8NCS7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.51■■■□□ 2.47
SLC44A5Q8NCS7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SLC44A5Q8NCS7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.48■■■□□ 2.47
SLC44A5Q8NCS7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.48■■■□□ 2.47
SLC44A5Q8NCS7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.47■■■□□ 2.47
SLC44A5Q8NCS7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SLC44A5Q8NCS7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.47■■■□□ 2.47
SLC44A5Q8NCS7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.47■■■□□ 2.47
SLC44A5Q8NCS7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SLC44A5Q8NCS7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
SLC44A5Q8NCS7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SLC44A5Q8NCS7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.45■■■□□ 2.47
SLC44A5Q8NCS7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
SLC44A5Q8NCS7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.44■■■□□ 2.46
SLC44A5Q8NCS7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.42■■■□□ 2.46
SLC44A5Q8NCS7 ABCB10P1-201ENST00000614297 2181 ntBASIC30.42■■■□□ 2.46
SLC44A5Q8NCS7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.42■■■□□ 2.46
SLC44A5Q8NCS7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SLC44A5Q8NCS7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.41■■■□□ 2.46
SLC44A5Q8NCS7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SLC44A5Q8NCS7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.4■■■□□ 2.46
SLC44A5Q8NCS7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.4■■■□□ 2.46
SLC44A5Q8NCS7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SLC44A5Q8NCS7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.39■■■□□ 2.46
SLC44A5Q8NCS7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SLC44A5Q8NCS7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
SLC44A5Q8NCS7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
SLC44A5Q8NCS7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC44A5Q8NCS7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SLC44A5Q8NCS7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SLC44A5Q8NCS7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SLC44A5Q8NCS7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
SLC44A5Q8NCS7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC44A5Q8NCS7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SLC44A5Q8NCS7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.35■■■□□ 2.45
SLC44A5Q8NCS7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SLC44A5Q8NCS7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SLC44A5Q8NCS7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SLC44A5Q8NCS7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SLC44A5Q8NCS7 AC110285.7-201ENST00000624417 1536 ntBASIC30.34■■■□□ 2.45
SLC44A5Q8NCS7 HSD17B1P1-201ENST00000590052 955 ntBASIC30.34■■■□□ 2.45
SLC44A5Q8NCS7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SLC44A5Q8NCS7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC44A5Q8NCS7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
SLC44A5Q8NCS7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
SLC44A5Q8NCS7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SLC44A5Q8NCS7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
SLC44A5Q8NCS7 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.32■■■□□ 2.44
SLC44A5Q8NCS7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.32■■■□□ 2.44
SLC44A5Q8NCS7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SLC44A5Q8NCS7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SLC44A5Q8NCS7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC44A5Q8NCS7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SLC44A5Q8NCS7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SLC44A5Q8NCS7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
SLC44A5Q8NCS7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.31■■■□□ 2.44
SLC44A5Q8NCS7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC44A5Q8NCS7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
SLC44A5Q8NCS7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC44A5Q8NCS7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
SLC44A5Q8NCS7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SLC44A5Q8NCS7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
SLC44A5Q8NCS7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.28■■■□□ 2.44
SLC44A5Q8NCS7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.28■■■□□ 2.44
SLC44A5Q8NCS7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.27■■■□□ 2.44
SLC44A5Q8NCS7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
SLC44A5Q8NCS7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.27■■■□□ 2.44
SLC44A5Q8NCS7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.26■■■□□ 2.44
SLC44A5Q8NCS7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SLC44A5Q8NCS7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.25■■■□□ 2.43
SLC44A5Q8NCS7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.25■■■□□ 2.43
SLC44A5Q8NCS7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SLC44A5Q8NCS7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.25■■■□□ 2.43
SLC44A5Q8NCS7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.25■■■□□ 2.43
SLC44A5Q8NCS7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
SLC44A5Q8NCS7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SLC44A5Q8NCS7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.24■■■□□ 2.43
SLC44A5Q8NCS7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
SLC44A5Q8NCS7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SLC44A5Q8NCS7 AL139393.2-201ENST00000608721 2025 ntBASIC30.23■■■□□ 2.43
SLC44A5Q8NCS7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SLC44A5Q8NCS7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SLC44A5Q8NCS7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SLC44A5Q8NCS7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
SLC44A5Q8NCS7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SLC44A5Q8NCS7 AC100797.4-201ENST00000631653 1827 ntBASIC30.22■■■□□ 2.43
SLC44A5Q8NCS7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms