Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 AL133380.1-201ENST00000506013 324 ntBASIC21.01■□□□□ 0.95
LRTM2Q8N967 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LRTM2Q8N967 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21■□□□□ 0.95
LRTM2Q8N967 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LRTM2Q8N967 AL449106.1-201ENST00000608517 1980 ntBASIC21■□□□□ 0.95
LRTM2Q8N967 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LRTM2Q8N967 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRTM2Q8N967 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRTM2Q8N967 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRTM2Q8N967 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRTM2Q8N967 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
LRTM2Q8N967 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LRTM2Q8N967 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LRTM2Q8N967 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.98■□□□□ 0.95
LRTM2Q8N967 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM2Q8N967 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM2Q8N967 AP002365.1-201ENST00000603448 772 ntBASIC20.97■□□□□ 0.95
LRTM2Q8N967 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRTM2Q8N967 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
LRTM2Q8N967 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM2Q8N967 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRTM2Q8N967 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM2Q8N967 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRTM2Q8N967 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LRTM2Q8N967 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LRTM2Q8N967 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM2Q8N967 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM2Q8N967 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM2Q8N967 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM2Q8N967 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRTM2Q8N967 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.93■□□□□ 0.94
LRTM2Q8N967 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.93■□□□□ 0.94
LRTM2Q8N967 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM2Q8N967 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM2Q8N967 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM2Q8N967 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LRTM2Q8N967 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM2Q8N967 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRTM2Q8N967 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.93■□□□□ 0.94
LRTM2Q8N967 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRTM2Q8N967 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.92■□□□□ 0.94
LRTM2Q8N967 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LRTM2Q8N967 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRTM2Q8N967 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.91■□□□□ 0.94
LRTM2Q8N967 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.91■□□□□ 0.94
LRTM2Q8N967 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.9■□□□□ 0.94
LRTM2Q8N967 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM2Q8N967 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM2Q8N967 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.9■□□□□ 0.94
LRTM2Q8N967 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.9■□□□□ 0.94
LRTM2Q8N967 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM2Q8N967 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRTM2Q8N967 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LRTM2Q8N967 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRTM2Q8N967 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LRTM2Q8N967 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.89■□□□□ 0.93
LRTM2Q8N967 AC091060.1-201ENST00000623524 1766 ntBASIC20.89■□□□□ 0.93
LRTM2Q8N967 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRTM2Q8N967 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.88■□□□□ 0.93
LRTM2Q8N967 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.88■□□□□ 0.93
LRTM2Q8N967 AC127502.1-201ENST00000399971 1502 ntBASIC20.88■□□□□ 0.93
LRTM2Q8N967 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM2Q8N967 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LRTM2Q8N967 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.87■□□□□ 0.93
LRTM2Q8N967 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LRTM2Q8N967 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LRTM2Q8N967 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM2Q8N967 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRTM2Q8N967 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.86■□□□□ 0.93
LRTM2Q8N967 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM2Q8N967 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM2Q8N967 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRTM2Q8N967 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRTM2Q8N967 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRTM2Q8N967 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LRTM2Q8N967 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM2Q8N967 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM2Q8N967 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM2Q8N967 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM2Q8N967 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRTM2Q8N967 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRTM2Q8N967 AP002414.2-202ENST00000590929 1450 ntBASIC20.83■□□□□ 0.93
LRTM2Q8N967 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.83■□□□□ 0.93
LRTM2Q8N967 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRTM2Q8N967 AC100797.4-201ENST00000631653 1827 ntBASIC20.83■□□□□ 0.92
LRTM2Q8N967 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM2Q8N967 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
LRTM2Q8N967 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM2Q8N967 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM2Q8N967 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRTM2Q8N967 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM2Q8N967 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM2Q8N967 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LRTM2Q8N967 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRTM2Q8N967 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.81■□□□□ 0.92
LRTM2Q8N967 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.8■□□□□ 0.92
LRTM2Q8N967 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRTM2Q8N967 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LRTM2Q8N967 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRTM2Q8N967 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms