Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PAF1Q8N7H5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
PAF1Q8N7H5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.11■■□□□ 1.77
PAF1Q8N7H5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PAF1Q8N7H5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
PAF1Q8N7H5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PAF1Q8N7H5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.1■■□□□ 1.77
PAF1Q8N7H5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.1■■□□□ 1.77
PAF1Q8N7H5 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PAF1Q8N7H5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
PAF1Q8N7H5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
PAF1Q8N7H5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.09■■□□□ 1.77
PAF1Q8N7H5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.09■■□□□ 1.77
PAF1Q8N7H5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
PAF1Q8N7H5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.08■■□□□ 1.77
PAF1Q8N7H5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.08■■□□□ 1.77
PAF1Q8N7H5 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.06■■□□□ 1.76
PAF1Q8N7H5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PAF1Q8N7H5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
PAF1Q8N7H5 LINC00273-201ENST00000539813 1452 ntBASIC26.06■■□□□ 1.76
PAF1Q8N7H5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PAF1Q8N7H5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
PAF1Q8N7H5 LINC01971-201ENST00000617888 1048 ntBASIC26.05■■□□□ 1.76
PAF1Q8N7H5 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.04■■□□□ 1.76
PAF1Q8N7H5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PAF1Q8N7H5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.04■■□□□ 1.76
PAF1Q8N7H5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
PAF1Q8N7H5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
PAF1Q8N7H5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PAF1Q8N7H5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.03■■□□□ 1.76
PAF1Q8N7H5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
PAF1Q8N7H5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PAF1Q8N7H5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PAF1Q8N7H5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PAF1Q8N7H5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PAF1Q8N7H5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.01■■□□□ 1.75
PAF1Q8N7H5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PAF1Q8N7H5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PAF1Q8N7H5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
PAF1Q8N7H5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26■■□□□ 1.75
PAF1Q8N7H5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PAF1Q8N7H5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PAF1Q8N7H5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.99■■□□□ 1.75
PAF1Q8N7H5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PAF1Q8N7H5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.99■■□□□ 1.75
PAF1Q8N7H5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
PAF1Q8N7H5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PAF1Q8N7H5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PAF1Q8N7H5 DUX4L11-201ENST00000611504 1267 ntBASIC25.98■■□□□ 1.75
PAF1Q8N7H5 DUX4L12-201ENST00000614593 1267 ntBASIC25.98■■□□□ 1.75
PAF1Q8N7H5 DUX4L14-201ENST00000621227 1267 ntBASIC25.98■■□□□ 1.75
PAF1Q8N7H5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PAF1Q8N7H5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PAF1Q8N7H5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PAF1Q8N7H5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.96■■□□□ 1.75
PAF1Q8N7H5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.96■■□□□ 1.75
PAF1Q8N7H5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PAF1Q8N7H5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
PAF1Q8N7H5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.95■■□□□ 1.74
PAF1Q8N7H5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PAF1Q8N7H5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PAF1Q8N7H5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PAF1Q8N7H5 AC135983.2-203ENST00000454486 1613 ntBASIC25.94■■□□□ 1.74
PAF1Q8N7H5 WHAMMP2-203ENST00000563942 1603 ntBASIC25.94■■□□□ 1.74
PAF1Q8N7H5 AL139393.2-201ENST00000608721 2025 ntBASIC25.93■■□□□ 1.74
PAF1Q8N7H5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PAF1Q8N7H5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PAF1Q8N7H5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.93■■□□□ 1.74
PAF1Q8N7H5 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PAF1Q8N7H5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PAF1Q8N7H5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.93■■□□□ 1.74
PAF1Q8N7H5 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
PAF1Q8N7H5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.92■■□□□ 1.74
PAF1Q8N7H5 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PAF1Q8N7H5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
PAF1Q8N7H5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
PAF1Q8N7H5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PAF1Q8N7H5 AC139426.1-201ENST00000568218 2529 ntBASIC25.91■■□□□ 1.74
PAF1Q8N7H5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.9■■□□□ 1.74
PAF1Q8N7H5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.9■■□□□ 1.74
PAF1Q8N7H5 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.9■■□□□ 1.74
PAF1Q8N7H5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
PAF1Q8N7H5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PAF1Q8N7H5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.89■■□□□ 1.74
PAF1Q8N7H5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PAF1Q8N7H5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.89■■□□□ 1.74
PAF1Q8N7H5 HLA-V-202ENST00000446817 847 ntBASIC25.89■■□□□ 1.74
PAF1Q8N7H5 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PAF1Q8N7H5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
PAF1Q8N7H5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PAF1Q8N7H5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PAF1Q8N7H5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PAF1Q8N7H5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
PAF1Q8N7H5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.88■■□□□ 1.73
PAF1Q8N7H5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PAF1Q8N7H5 ABCB10P3-201ENST00000561950 2166 ntBASIC25.88■■□□□ 1.73
PAF1Q8N7H5 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PAF1Q8N7H5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PAF1Q8N7H5 AP004833.2-201ENST00000532228 1454 ntBASIC25.86■■□□□ 1.73
PAF1Q8N7H5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms