Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TTC9CQ8N5M4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 LINC00273-201ENST00000539813 1452 ntBASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 AC135983.2-203ENST00000454486 1613 ntBASIC20.2■□□□□ 0.82
TTC9CQ8N5M4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TTC9CQ8N5M4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC9CQ8N5M4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC9CQ8N5M4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TTC9CQ8N5M4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TTC9CQ8N5M4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.17■□□□□ 0.82
TTC9CQ8N5M4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.16■□□□□ 0.82
TTC9CQ8N5M4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TTC9CQ8N5M4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC9CQ8N5M4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.16■□□□□ 0.82
TTC9CQ8N5M4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TTC9CQ8N5M4 AC100797.4-201ENST00000631653 1827 ntBASIC20.16■□□□□ 0.82
TTC9CQ8N5M4 RPS2P35-201ENST00000443417 897 ntBASIC20.15■□□□□ 0.82
TTC9CQ8N5M4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TTC9CQ8N5M4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9CQ8N5M4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.15■□□□□ 0.82
TTC9CQ8N5M4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.15■□□□□ 0.82
TTC9CQ8N5M4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TTC9CQ8N5M4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.14■□□□□ 0.81
TTC9CQ8N5M4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TTC9CQ8N5M4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.14■□□□□ 0.81
TTC9CQ8N5M4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.14■□□□□ 0.81
TTC9CQ8N5M4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC9CQ8N5M4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9CQ8N5M4 WHAMMP2-203ENST00000563942 1603 ntBASIC20.13■□□□□ 0.81
TTC9CQ8N5M4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TTC9CQ8N5M4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.13■□□□□ 0.81
TTC9CQ8N5M4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC9CQ8N5M4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC9CQ8N5M4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.11■□□□□ 0.81
TTC9CQ8N5M4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.11■□□□□ 0.81
TTC9CQ8N5M4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9CQ8N5M4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.11■□□□□ 0.81
TTC9CQ8N5M4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9CQ8N5M4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9CQ8N5M4 DUX4L29-201ENST00000425409 679 ntBASIC20.1■□□□□ 0.81
TTC9CQ8N5M4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9CQ8N5M4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9CQ8N5M4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9CQ8N5M4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9CQ8N5M4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TTC9CQ8N5M4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9CQ8N5M4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9CQ8N5M4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.09■□□□□ 0.81
TTC9CQ8N5M4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9CQ8N5M4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.09■□□□□ 0.81
TTC9CQ8N5M4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC9CQ8N5M4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC9CQ8N5M4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC9CQ8N5M4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC9CQ8N5M4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC9CQ8N5M4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC9CQ8N5M4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TTC9CQ8N5M4 AC021231.2-201ENST00000594613 730 ntBASIC20.08■□□□□ 0.81
TTC9CQ8N5M4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
TTC9CQ8N5M4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
TTC9CQ8N5M4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.08■□□□□ 0.8
TTC9CQ8N5M4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC9CQ8N5M4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9CQ8N5M4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC9CQ8N5M4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9CQ8N5M4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9CQ8N5M4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9CQ8N5M4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9CQ8N5M4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9CQ8N5M4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9CQ8N5M4 AP002414.2-202ENST00000590929 1450 ntBASIC20.05■□□□□ 0.8
TTC9CQ8N5M4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC9CQ8N5M4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TTC9CQ8N5M4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9CQ8N5M4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9CQ8N5M4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TTC9CQ8N5M4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9CQ8N5M4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9CQ8N5M4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms