Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CROCCP3Q8IVE0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CROCCP3Q8IVE0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CROCCP3Q8IVE0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CROCCP3Q8IVE0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
CROCCP3Q8IVE0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.2■■□□□ 1.3
CROCCP3Q8IVE0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CROCCP3Q8IVE0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.2■■□□□ 1.3
CROCCP3Q8IVE0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CROCCP3Q8IVE0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.19■■□□□ 1.3
CROCCP3Q8IVE0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CROCCP3Q8IVE0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CROCCP3Q8IVE0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.19■■□□□ 1.3
CROCCP3Q8IVE0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CROCCP3Q8IVE0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CROCCP3Q8IVE0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CROCCP3Q8IVE0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CROCCP3Q8IVE0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CROCCP3Q8IVE0 BX255925.1-201ENST00000566954 1854 ntBASIC23.18■■□□□ 1.3
CROCCP3Q8IVE0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
CROCCP3Q8IVE0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CROCCP3Q8IVE0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
CROCCP3Q8IVE0 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CROCCP3Q8IVE0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CROCCP3Q8IVE0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CROCCP3Q8IVE0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
CROCCP3Q8IVE0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CROCCP3Q8IVE0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CROCCP3Q8IVE0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CROCCP3Q8IVE0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
CROCCP3Q8IVE0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CROCCP3Q8IVE0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CROCCP3Q8IVE0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CROCCP3Q8IVE0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CROCCP3Q8IVE0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CROCCP3Q8IVE0 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CROCCP3Q8IVE0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC23.12■■□□□ 1.29
CROCCP3Q8IVE0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CROCCP3Q8IVE0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
CROCCP3Q8IVE0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CROCCP3Q8IVE0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CROCCP3Q8IVE0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.1■■□□□ 1.29
CROCCP3Q8IVE0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.1■■□□□ 1.29
CROCCP3Q8IVE0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CROCCP3Q8IVE0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CROCCP3Q8IVE0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CROCCP3Q8IVE0 AC091060.1-201ENST00000623524 1766 ntBASIC23.09■■□□□ 1.29
CROCCP3Q8IVE0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CROCCP3Q8IVE0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.09■■□□□ 1.29
CROCCP3Q8IVE0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.08■■□□□ 1.29
CROCCP3Q8IVE0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CROCCP3Q8IVE0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CROCCP3Q8IVE0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CROCCP3Q8IVE0 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CROCCP3Q8IVE0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CROCCP3Q8IVE0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC23.07■■□□□ 1.28
CROCCP3Q8IVE0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.07■■□□□ 1.28
CROCCP3Q8IVE0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CROCCP3Q8IVE0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CROCCP3Q8IVE0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
CROCCP3Q8IVE0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CROCCP3Q8IVE0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CROCCP3Q8IVE0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CROCCP3Q8IVE0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CROCCP3Q8IVE0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CROCCP3Q8IVE0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CROCCP3Q8IVE0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CROCCP3Q8IVE0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CROCCP3Q8IVE0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
CROCCP3Q8IVE0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CROCCP3Q8IVE0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CROCCP3Q8IVE0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.03■■□□□ 1.28
CROCCP3Q8IVE0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CROCCP3Q8IVE0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CROCCP3Q8IVE0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CROCCP3Q8IVE0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CROCCP3Q8IVE0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CROCCP3Q8IVE0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CROCCP3Q8IVE0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CROCCP3Q8IVE0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
CROCCP3Q8IVE0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.01■■□□□ 1.27
CROCCP3Q8IVE0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CROCCP3Q8IVE0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23■■□□□ 1.27
CROCCP3Q8IVE0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
CROCCP3Q8IVE0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CROCCP3Q8IVE0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23■■□□□ 1.27
CROCCP3Q8IVE0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC23■■□□□ 1.27
CROCCP3Q8IVE0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CROCCP3Q8IVE0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CROCCP3Q8IVE0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CROCCP3Q8IVE0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CROCCP3Q8IVE0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CROCCP3Q8IVE0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms