Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
LRRTM4Q86VH4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRRTM4Q86VH4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
LRRTM4Q86VH4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LRRTM4Q86VH4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
LRRTM4Q86VH4 MIR3648-2-201ENST00000581792 180 ntBASIC25.31■■□□□ 1.64
LRRTM4Q86VH4 MIR3648-1-201ENST00000615959 180 ntBASIC25.31■■□□□ 1.64
LRRTM4Q86VH4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.31■■□□□ 1.64
LRRTM4Q86VH4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
LRRTM4Q86VH4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRTM4Q86VH4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRTM4Q86VH4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
LRRTM4Q86VH4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRTM4Q86VH4 CR559946.2-201ENST00000623684 991 ntBASIC25.3■■□□□ 1.64
LRRTM4Q86VH4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRTM4Q86VH4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRTM4Q86VH4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRTM4Q86VH4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRTM4Q86VH4 HLA-V-202ENST00000446817 847 ntBASIC25.29■■□□□ 1.64
LRRTM4Q86VH4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRTM4Q86VH4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRTM4Q86VH4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRTM4Q86VH4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LRRTM4Q86VH4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRTM4Q86VH4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.28■■□□□ 1.64
LRRTM4Q86VH4 AL139393.2-201ENST00000608721 2025 ntBASIC25.27■■□□□ 1.64
LRRTM4Q86VH4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
LRRTM4Q86VH4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRTM4Q86VH4 AC016575.1-201ENST00000607026 382 ntBASIC25.27■■□□□ 1.64
LRRTM4Q86VH4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRTM4Q86VH4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
LRRTM4Q86VH4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.26■■□□□ 1.63
LRRTM4Q86VH4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.26■■□□□ 1.63
LRRTM4Q86VH4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LRRTM4Q86VH4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.25■■□□□ 1.63
LRRTM4Q86VH4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.25■■□□□ 1.63
LRRTM4Q86VH4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.24■■□□□ 1.63
LRRTM4Q86VH4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.24■■□□□ 1.63
LRRTM4Q86VH4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRTM4Q86VH4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.23■■□□□ 1.63
LRRTM4Q86VH4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.23■■□□□ 1.63
LRRTM4Q86VH4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRTM4Q86VH4 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.22■■□□□ 1.63
LRRTM4Q86VH4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.22■■□□□ 1.63
LRRTM4Q86VH4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LRRTM4Q86VH4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRRTM4Q86VH4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRRTM4Q86VH4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.21■■□□□ 1.63
LRRTM4Q86VH4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LRRTM4Q86VH4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.2■■□□□ 1.62
LRRTM4Q86VH4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.2■■□□□ 1.62
LRRTM4Q86VH4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.2■■□□□ 1.62
LRRTM4Q86VH4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
LRRTM4Q86VH4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.2■■□□□ 1.62
LRRTM4Q86VH4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.19■■□□□ 1.62
LRRTM4Q86VH4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.18■■□□□ 1.62
LRRTM4Q86VH4 MIR639-201ENST00000384974 98 ntBASIC25.18■■□□□ 1.62
LRRTM4Q86VH4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.18■■□□□ 1.62
LRRTM4Q86VH4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.18■■□□□ 1.62
LRRTM4Q86VH4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
LRRTM4Q86VH4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRTM4Q86VH4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LRRTM4Q86VH4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.17■■□□□ 1.62
LRRTM4Q86VH4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRTM4Q86VH4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRTM4Q86VH4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRTM4Q86VH4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRTM4Q86VH4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.15■■□□□ 1.62
LRRTM4Q86VH4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
LRRTM4Q86VH4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LRRTM4Q86VH4 AC110285.7-201ENST00000624417 1536 ntBASIC25.14■■□□□ 1.62
LRRTM4Q86VH4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
LRRTM4Q86VH4 AC100797.4-201ENST00000631653 1827 ntBASIC25.13■■□□□ 1.61
LRRTM4Q86VH4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.13■■□□□ 1.61
LRRTM4Q86VH4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LRRTM4Q86VH4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.13■■□□□ 1.61
LRRTM4Q86VH4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
LRRTM4Q86VH4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LRRTM4Q86VH4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LRRTM4Q86VH4 ABCB10P3-201ENST00000561950 2166 ntBASIC25.11■■□□□ 1.61
LRRTM4Q86VH4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
LRRTM4Q86VH4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRTM4Q86VH4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.1■■□□□ 1.61
LRRTM4Q86VH4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.1■■□□□ 1.61
LRRTM4Q86VH4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.09■■□□□ 1.61
LRRTM4Q86VH4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRTM4Q86VH4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.09■■□□□ 1.61
LRRTM4Q86VH4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.09■■□□□ 1.61
LRRTM4Q86VH4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
LRRTM4Q86VH4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
LRRTM4Q86VH4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRRTM4Q86VH4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRRTM4Q86VH4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.6
LRRTM4Q86VH4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
LRRTM4Q86VH4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRRTM4Q86VH4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
LRRTM4Q86VH4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.06■■□□□ 1.6
LRRTM4Q86VH4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LRRTM4Q86VH4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
LRRTM4Q86VH4 MIR4449-201ENST00000578365 66 ntBASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms