Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF546Q86UE3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF546Q86UE3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF546Q86UE3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF546Q86UE3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF546Q86UE3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF546Q86UE3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF546Q86UE3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
ZNF546Q86UE3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF546Q86UE3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF546Q86UE3 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF546Q86UE3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF546Q86UE3 AC006077.2-201ENST00000623591 457 ntBASIC21.23■□□□□ 0.99
ZNF546Q86UE3 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF546Q86UE3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF546Q86UE3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.22■□□□□ 0.99
ZNF546Q86UE3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF546Q86UE3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF546Q86UE3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF546Q86UE3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF546Q86UE3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZNF546Q86UE3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.21■□□□□ 0.99
ZNF546Q86UE3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF546Q86UE3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF546Q86UE3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF546Q86UE3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF546Q86UE3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF546Q86UE3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF546Q86UE3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ZNF546Q86UE3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF546Q86UE3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNF546Q86UE3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ZNF546Q86UE3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF546Q86UE3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ZNF546Q86UE3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF546Q86UE3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.17■□□□□ 0.98
ZNF546Q86UE3 AC091060.1-201ENST00000623524 1766 ntBASIC21.17■□□□□ 0.98
ZNF546Q86UE3 AC020928.2-201ENST00000588717 2197 ntBASIC21.17■□□□□ 0.98
ZNF546Q86UE3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.16■□□□□ 0.98
ZNF546Q86UE3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF546Q86UE3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF546Q86UE3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF546Q86UE3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF546Q86UE3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
ZNF546Q86UE3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF546Q86UE3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF546Q86UE3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF546Q86UE3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF546Q86UE3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF546Q86UE3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
ZNF546Q86UE3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF546Q86UE3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ZNF546Q86UE3 AC093323.1-202ENST00000635031 2045 ntBASIC21.12■□□□□ 0.97
ZNF546Q86UE3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF546Q86UE3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF546Q86UE3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF546Q86UE3 LINC01003-201ENST00000564834 1764 ntBASIC21.11■□□□□ 0.97
ZNF546Q86UE3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ZNF546Q86UE3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ZNF546Q86UE3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF546Q86UE3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF546Q86UE3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF546Q86UE3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF546Q86UE3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF546Q86UE3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.08■□□□□ 0.97
ZNF546Q86UE3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF546Q86UE3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.08■□□□□ 0.97
ZNF546Q86UE3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.08■□□□□ 0.96
ZNF546Q86UE3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF546Q86UE3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF546Q86UE3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF546Q86UE3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF546Q86UE3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF546Q86UE3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ZNF546Q86UE3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF546Q86UE3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF546Q86UE3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF546Q86UE3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF546Q86UE3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF546Q86UE3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF546Q86UE3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF546Q86UE3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF546Q86UE3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF546Q86UE3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms