Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.83■■■□□ 2.85
COPS6Q7L5N1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
COPS6Q7L5N1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
COPS6Q7L5N1 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
COPS6Q7L5N1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
COPS6Q7L5N1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
COPS6Q7L5N1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
COPS6Q7L5N1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
COPS6Q7L5N1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.78■■■□□ 2.84
COPS6Q7L5N1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.78■■■□□ 2.84
COPS6Q7L5N1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
COPS6Q7L5N1 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
COPS6Q7L5N1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
COPS6Q7L5N1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
COPS6Q7L5N1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.77■■■□□ 2.84
COPS6Q7L5N1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
COPS6Q7L5N1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC32.76■■■□□ 2.84
COPS6Q7L5N1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
COPS6Q7L5N1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC32.76■■■□□ 2.83
COPS6Q7L5N1 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.75■■■□□ 2.83
COPS6Q7L5N1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
COPS6Q7L5N1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.74■■■□□ 2.83
COPS6Q7L5N1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
COPS6Q7L5N1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC32.73■■■□□ 2.83
COPS6Q7L5N1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COPS6Q7L5N1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC32.72■■■□□ 2.83
COPS6Q7L5N1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
COPS6Q7L5N1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.71■■■□□ 2.83
COPS6Q7L5N1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
COPS6Q7L5N1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.71■■■□□ 2.83
COPS6Q7L5N1 AC110285.7-201ENST00000624417 1536 ntBASIC32.71■■■□□ 2.83
COPS6Q7L5N1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.7■■■□□ 2.83
COPS6Q7L5N1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
COPS6Q7L5N1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
COPS6Q7L5N1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
COPS6Q7L5N1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
COPS6Q7L5N1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
COPS6Q7L5N1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
COPS6Q7L5N1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.67■■■□□ 2.82
COPS6Q7L5N1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
COPS6Q7L5N1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
COPS6Q7L5N1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
COPS6Q7L5N1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
COPS6Q7L5N1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
COPS6Q7L5N1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
COPS6Q7L5N1 AC008813.1-201ENST00000536597 885 ntBASIC32.64■■■□□ 2.82
COPS6Q7L5N1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
COPS6Q7L5N1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
COPS6Q7L5N1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
COPS6Q7L5N1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.63■■■□□ 2.81
COPS6Q7L5N1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
COPS6Q7L5N1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
COPS6Q7L5N1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.62■■■□□ 2.81
COPS6Q7L5N1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.61■■■□□ 2.81
COPS6Q7L5N1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
COPS6Q7L5N1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC32.61■■■□□ 2.81
COPS6Q7L5N1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.6■■■□□ 2.81
COPS6Q7L5N1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC32.6■■■□□ 2.81
COPS6Q7L5N1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.59■■■□□ 2.81
COPS6Q7L5N1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
COPS6Q7L5N1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COPS6Q7L5N1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
COPS6Q7L5N1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.58■■■□□ 2.81
COPS6Q7L5N1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
COPS6Q7L5N1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC32.57■■■□□ 2.8
COPS6Q7L5N1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.57■■■□□ 2.8
COPS6Q7L5N1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
COPS6Q7L5N1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
COPS6Q7L5N1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
COPS6Q7L5N1 GPX1-201ENST00000419349 1106 ntBASIC32.56■■■□□ 2.8
COPS6Q7L5N1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC32.56■■■□□ 2.8
COPS6Q7L5N1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
COPS6Q7L5N1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
COPS6Q7L5N1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC32.55■■■□□ 2.8
COPS6Q7L5N1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
COPS6Q7L5N1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.54■■■□□ 2.8
COPS6Q7L5N1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
COPS6Q7L5N1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.54■■■□□ 2.8
COPS6Q7L5N1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
COPS6Q7L5N1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
COPS6Q7L5N1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
COPS6Q7L5N1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
COPS6Q7L5N1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms